DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4849 and mEFTu2

DIOPT Version :10

Sequence 1:NP_651605.1 Gene:CG4849 / 43358 FlyBaseID:FBgn0039566 Length:975 Species:Drosophila melanogaster
Sequence 2:NP_610288.1 Gene:mEFTu2 / 35681 FlyBaseID:FBgn0033184 Length:456 Species:Drosophila melanogaster


Alignment Length:210 Identity:60/210 - (28%)
Similarity:86/210 - (40%) Gaps:31/210 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   133 NVALVGHLHHGKTTFVDCLIRQTHPQFETMEERQLRYTDTLFTEQERGCSIKATPVTLVLQDVKQ 197
            ||..:||:.|||||....:.| ...|....|.......|....|:.||.:|.|..:.   ....:
  Fly    59 NVGTIGHVDHGKTTLTAAITR-IQSQKGLAEYLSYDQIDRAPEEKARGITINACHIG---YSTTE 119

  Fly   198 KSYLLNIFDTPGHVNFSDEATAAMRMSDGVVLFIDAAEGVMLNT-ERLLKHAVQERQAITVCINK 261
            ::|...  |.|||.::.....:.....||.:|.:.|.:|.|..| |.||.......|.|.|.|||
  Fly   120 RTYAHT--DCPGHADYIKNMISGASQMDGAILVVAATDGQMPQTREHLLLAKQVGIQRIIVFINK 182

  Fly   262 ---IDRLILELKLPPQDAYFKLKHIVE-EVNGLLSTYGAPDDNLLVSPIL-GNVCFASSLYGFCF 321
               :|:.:|||              || |:..:||.:|....|   ||:: |:...|.......|
  Fly   183 ADLVDQEVLEL--------------VEIEMREMLSDFGFDGVN---SPVICGSALLALREDKSEF 230

  Fly   322 TLKSFAKL--YADTY 334
            .:.|..||  ..|:|
  Fly   231 GVPSIEKLLEQCDSY 245

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4849NP_651605.1 EFTUD2 4..111 CDD:464968
PRK13351 115..957 CDD:481252 60/210 (29%)
mEFTu2NP_610288.1 TufA 53..436 CDD:439820 60/210 (29%)
Blue background indicates that the domain is not in the aligned region.

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