DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4849 and eef2l2

DIOPT Version :9

Sequence 1:NP_651605.1 Gene:CG4849 / 43358 FlyBaseID:FBgn0039566 Length:975 Species:Drosophila melanogaster
Sequence 2:XP_021332246.1 Gene:eef2l2 / 336168 ZFINID:ZDB-GENE-030131-8112 Length:861 Species:Danio rerio


Alignment Length:878 Identity:333/878 - (37%)
Similarity:518/878 - (58%) Gaps:58/878 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly   116 YDMEFMADLMDTPPLIRNVALVGHLHHGKTTFVDCLIRQTHPQFETMEERQLRYTDTLFTEQERG 180
            :.::.:.::||....|||::::.|:.|||:|..|.|:.:. ....:....:.|:|||...||||.
Zfish     4 FTVDQIREIMDKKSNIRNMSVIAHVDHGKSTLTDSLVCKA-GIIASARAGETRFTDTRKDEQERC 67

  Fly   181 CSIKATPVTLVLQ-------DVKQ----KSYLLNIFDTPGHVNFSDEATAAMRMSDGVVLFIDAA 234
            .:||:|.::|..:       .:||    ..:|:|:.|:||||:||.|.|||:|::||.::.:|..
Zfish    68 ITIKSTAISLYYELSENDSAFIKQCKDGSGFLINLIDSPGHVDFSSEVTAALRVTDGALVVVDCV 132

  Fly   235 EGVMLNTERLLKHAVQERQAITVCINKIDRLILELKLPPQDAYFKLKHIVEEVNGLLSTYG---- 295
            .||.:.||.:|:.|:.||....:.:||:||.:|||:|.|.:.:...:.|||.||.::||||    
Zfish   133 SGVCVQTETVLRQAIAERIKPVLMMNKMDRALLELQLEPDELFQTFQRIVENVNVIISTYGEGEH 197

  Fly   296 APDDNLLVSPILGNVCFASSLYGFCFTLKSFAKLY-------ADTYEG--------VAYLDFAKR 345
            .|..|::|.|::|.|.|.|.|:|:.||||.||::|       .|..:|        ....:..|:
Zfish   198 GPMGNIMVDPVIGTVGFGSGLHGWAFTLKQFAEMYVAKFAAKGDKKKGDLPPAERAKKVEEMMKK 262

  Fly   346 LWGDMYFNSKTRKFSKKQPHNSAQ-----RSFVEFILEPMYKLIAQVVGDVDTTLSDTLAELNVR 405
            ||||.||:....||||..  |:|.     |:|.:.:|:|::|:...::..........:.:|.|:
Zfish   263 LWGDKYFDPSCGKFSKTA--NNADGKKLPRTFCQLVLDPIFKVFDAIMNFKKEETQKLIEKLEVK 325

  Fly   406 VSKEEMKSNIRPLLRLVCNRFMGDCSGFVDMCVEHIKSPLENAKRKVDHIYTGPKEGDIYRDMIS 470
            :..|:.:...:|||:.|..|::......:.|...|:.||:...:.:.:.:|.||.:.:....:.:
Zfish   326 LDAEDKEKEGKPLLKAVMRRWLPAGDALLQMITIHLPSPVTAQRYRCELLYEGPGDDEAAMGIKN 390

  Fly   471 CNQYGTLMVHSSKMYPNDDCTFFQVLARIVSGTLHAGQEVRVLGENYTLQDEEDSRILQVGRLWV 535
            |:....||::.|||.|..|...|....|:.||.:..||:||::|.|:|...:||..:..:.|..:
Zfish   391 CDPKAPLMMYISKMVPTTDKGRFYAFGRVFSGIVSTGQKVRIMGPNFTPGKKEDLYLKPIQRTIL 455

  Fly   536 FESRYKVELNRVPAGNWVLIEGIDQCIVKTSTIVDINVPEDLYIFRPLKFNTQSIIKIAVEPVNP 600
            ...||...:..||.||.|.:.|:||.:|||.||...   |:.:..|.:||:...::::|||..||
Zfish   456 MMGRYVEPIEDVPCGNIVGLVGVDQFLVKTGTITTF---ENSHNMRVMKFSVSPVVRVAVEAKNP 517

  Fly   601 SELPKMLDGLRKVNKSYPLLSTRVEESGEHVILGTGELYLDCVMHDLRKMYSEIDIKVADPVVAF 665
            ::|||:::||:::.||.|::...:||||||::.|.|||:|:..:.||.:.::.|.:|.:||||::
Zfish   518 ADLPKLVEGLKRLAKSDPMVQCIIEESGEHIVAGAGELHLEICLKDLEEDHACIPLKKSDPVVSY 582

  Fly   666 CETVVETSSLKCFAETPNKKNKITMISEPLEKGLAEDIENGTVCINWNKKRIGEFFQVNYDWDLL 730
            .|||.:.|...|.:::|||.|::.|.|.|...||||||:.|.|......|....:....|:|::.
Zfish   583 RETVSDESDQVCLSKSPNKHNRLYMKSRPFPDGLAEDIDKGDVSSRQELKLRARYLAEKYEWEVA 647

  Fly   731 AARSIWAFGPDSTGPNILVDDTLPSEVDKNLLTAVKDSIVQGFQWGTREGPLCEEPIRNVKFKIL 795
            .||.||.||||.||||||||.|...:    .|..:|||:|.||||.|:||.||||.:|.|:|.|.
Zfish   648 EARKIWCFGPDGTGPNILVDITKGVQ----YLNEIKDSVVAGFQWATKEGALCEENMRAVRFDIH 708

  Fly   796 DGVIANEALHRGGGQIIPTARRVAYSAFLMATPRLMEPYLFVEVQAPADCVSAVYTVLARRRGHV 860
            |..:..:|:||||||||||||||.|::.|.|.||||||...||:|.|...|..:|.||.|:||||
Zfish   709 DVTLHADAIHRGGGQIIPTARRVLYASVLTAQPRLMEPIYLVEIQCPEQVVGGIYGVLNRKRGHV 773

  Fly   861 TQDAPVSGSPIYTIKAFIPAIDSFGFETDLRTHTQGQAFCLSVFHHWQIVPGDPLDKSIIIRPLE 925
            .:::.|:|:||:.:||::|..:||||..|||::|.||||...||.||||:||||.|.:     .:
Zfish   774 FEESQVAGTPIFVVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQILPGDPYDVN-----SK 833

  Fly   926 PQQASHLAREFMIKTRRRKGLSEDV-SINKFFD 957
            |.|       .:..||:||||.|.: :::.|.|
Zfish   834 PSQ-------IVADTRKRKGLKEGIPALDNFLD 859

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4849NP_651605.1 EFTUD2 4..111 CDD:292623
PTZ00416 115..957 CDD:240409 332/876 (38%)
Snu114p 132..340 CDD:206730 85/237 (36%)
Translation_Factor_II_like 477..568 CDD:295476 34/90 (38%)
snRNP_III 589..660 CDD:293921 28/70 (40%)
EF2_IV_snRNP 660..837 CDD:238840 89/176 (51%)
eEF2_C_snRNP 832..911 CDD:239765 40/78 (51%)
eef2l2XP_021332246.1 PTZ00416 1..861 CDD:240409 333/878 (38%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0480
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D140796at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100212
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.720

Return to query results.
Submit another query.