Sequence 1: | NP_651605.1 | Gene: | CG4849 / 43358 | FlyBaseID: | FBgn0039566 | Length: | 975 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001101004.1 | Gene: | Efl1 / 308789 | RGDID: | 1306521 | Length: | 1127 | Species: | Rattus norvegicus |
Alignment Length: | 1116 | Identity: | 274/1116 - (24%) |
---|---|---|---|
Similarity: | 458/1116 - (41%) | Gaps: | 301/1116 - (26%) |
- Green bases have known domain annotations that are detailed below.
Fly 118 MEFMADLMDTPPLIRNVALVGHLHHGKTTFVDCLIRQTHPQFETMEERQLRYTDTLFTEQERGCS 182
Fly 183 IKATPVTLVLQDVKQKSYLLNIFDTPGHVNFSDEATAAMRMSDGVVLFIDAAEGVMLNTERLLKH 247
Fly 248 AVQERQAITVCINKIDRLILELKLPPQDAYFKLKHIVEEVNGLLSTY------------------ 294
Fly 295 ------------------GAPDDNLLVSPILGNVCFASSLYGFCFTLKSFAKLYADTYEGVAYLD 341
Fly 342 FAKRLWGDMYFNSKTRKFSKKQPHNSAQRSFVEFILEPMYKLIAQVVGDVDTTLSDTLAELNVRV 406
Fly 407 -SKEEMKSNIRPLLRLVCNRFMGDCSGFVDMCVEHIKSPLENAKRKVDHIY-TG-------PKEG 462
Fly 463 DIYR-DMISCNQYGT--LMVHSSKMYPND------------------------------------ 488
Fly 489 ----------------------------DCT---------------FFQVLARIVSGTLHAGQEV 510
Fly 511 RVLGENYTLQDEEDSRILQ-----------------------VGRLWVFESRYKVELNRVPAGNW 552
Fly 553 VLIEGIDQCIVKTSTIVDI-NVPEDLYIFRPLKFNTQSIIKIAVEPVNPSELPKMLDGLRKVNKS 616
Fly 617 YPLLSTRVEESGEHVILGTGELYLDCVMHDLRKMYSEIDIKVADPVVAFCETVVETSSLKCFAET 681
Fly 682 PNKKNKITMISEPLE------KGLAEDIENGTVCINWNKK-------------RIGEFFQVNYD- 726
Fly 727 ----------------------------WDL-------LAAR-------SIWAFGPDSTGPNILV 749
Fly 750 DDTL---------PSEVDKNLLTAVKD---SIVQGFQWGTREGPLCEEPIRNVKFKILDGVIANE 802
Fly 803 ALHRG----------------------------------------------------------GG 809
Fly 810 QIIPTARRVAYSAFLMATPRLMEPYLFVEVQAPADCVSAVYTVLARRRGHVTQDAPVSGSPIYTI 874
Fly 875 KAFIPAIDSFGFETDLRTHTQGQAFCLSVFHHWQIVPGDPL----DKSIIIRPLEPQQASHLARE 935
Fly 936 FMIKTRRRKGL 946 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CG4849 | NP_651605.1 | EFTUD2 | 4..111 | CDD:292623 | |
PTZ00416 | 115..957 | CDD:240409 | 274/1116 (25%) | ||
Snu114p | 132..340 | CDD:206730 | 82/243 (34%) | ||
Translation_Factor_II_like | 477..568 | CDD:295476 | 29/192 (15%) | ||
snRNP_III | 589..660 | CDD:293921 | 26/70 (37%) | ||
EF2_IV_snRNP | 660..837 | CDD:238840 | 57/308 (19%) | ||
eEF2_C_snRNP | 832..911 | CDD:239765 | 27/78 (35%) | ||
Efl1 | NP_001101004.1 | PTZ00416 | 1..1110 | CDD:240409 | 274/1116 (25%) |
EF2 | 20..253 | CDD:206672 | 80/234 (34%) | ||
EF2_II | 505..600 | CDD:293913 | 24/99 (24%) | ||
EF2_snRNP_III | 616..687 | CDD:293918 | 26/70 (37%) | ||
aeEF2_snRNP_like_IV | 687..993 | CDD:238839 | 57/307 (19%) | ||
eEF2_snRNP_like_C | 990..1068 | CDD:239763 | 27/77 (35%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG0480 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D140796at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.820 |