DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4849 and K10C3.5

DIOPT Version :9

Sequence 1:NP_651605.1 Gene:CG4849 / 43358 FlyBaseID:FBgn0039566 Length:975 Species:Drosophila melanogaster
Sequence 2:NP_001021564.1 Gene:K10C3.5 / 172838 WormBaseID:WBGene00010732 Length:894 Species:Caenorhabditis elegans


Alignment Length:931 Identity:236/931 - (25%)
Similarity:421/931 - (45%) Gaps:178/931 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   131 IRNVALVGHLHHGKTTFVDCLIRQTHPQFETMEERQLRYTDTLFTEQERGCSIKATPVTLVLQDV 195
            ||||.||.|:.||||:|.|.|: ..:....:....:|||.|:...||.||.::|::.::|:.:.:
 Worm    20 IRNVCLVAHVDHGKTSFADSLV-SANAVISSRMAGKLRYMDSREDEQTRGITMKSSGISLLCEPL 83

  Fly   196 KQKSYLLNIFDTPGHVNFSDEATAAMRMSDGVVLFIDAAEGVMLNTERLLKHAVQERQAITVCIN 260
                 |:|:.|:||||:||.|.|:|:.:||..:|.||..||:...||.|::..::..||:.:.||
 Worm    84 -----LINLIDSPGHVDFSGEVTSALILSDIALLLIDVIEGICSQTEALIRQVIRNGQAMILVIN 143

  Fly   261 KIDRLILELKLPPQDAYFKLKHIVEEVNGLLS-----------TYGAPDDN---LLVSPILGNVC 311
            |||||.:|||:...:||..:..::|.||..:|           |:|..:::   |...|..|||.
 Worm   144 KIDRLRVELKMSSSEAYQHMSRLIEGVNSCISQVLGGIVLEDDTWGNIEESEAKLHFDPAKGNVI 208

  Fly   312 FASSLYGFCFTLKSFAKLYADTYEGVAYLDFAKRLWGDMYFNSKTRKFSKKQPHNSAQRSFVEFI 376
            |:|:|:.:.|..:.||::.|:..: |........::||.:.:| |..........:....|...:
 Worm   209 FSSALHSYAFGCEDFAQIAAEKMK-VEKSALLPAMFGDFWIDS-TGSIRDGAAVKNKATLFERIV 271

  Fly   377 LEPMYKL--IAQVVGDVDTTLSDTLAELNVRVSK-------EEMKSNIRPL----LRLVCNRFMG 428
            |||::::  :..|..|. |.|::...:|.:.:..       :|:.....||    .|.|..    
 Worm   272 LEPLWRIHDLGLVENDA-TKLAEAAKKLGINLKSRRANEAFDELMRTWLPLPKASFRAVAR---- 331

  Fly   429 DCSGFVDMCVEHIKSPLENAKRKVDHIYTGPK-EGDIYRDMISCNQYGTLMVHSSKMYPNDD--C 490
                     ..:::|..: .:.::||: ||.: :..:.:.::.||.....:|...|:...:|  .
 Worm   332 ---------APNVRSTFD-TQHRLDHL-TGHRLDHPLRKFVLECNPEAMTLVFVVKLLQTEDKNL 385

  Fly   491 TFFQVLARIVSGTLHAGQEVRVLGENYTLQDEEDSRIL---QVGRLWVFESRYKVELNRVPAGNW 552
            |..:.:.|::||||..|..:      |.||.:.:|..:   ::.|:.:...|..:..:.|.:|  
 Worm   386 TSRRAICRVLSGTLRKGDTL------YVLQQQNNSSEVTSTKIDRISILRGRDSIPTDTVTSG-- 442

  Fly   553 VLIEGID-QCIVKTSTIVDINVPEDLYIFRPLKFNTQ---SIIKIAVEPVNPSELPKMLDGLRKV 613
             :|..|| :.:::.:|:.:  .|:    |..||..:|   ::::::   ::..:|..| |.||:.
 Worm   443 -MICTIDAEILLQNTTLCE--KPD----FPCLKIGSQTGEALVRVS---ISTQQLDDM-DDLREK 496

  Fly   614 NKSYPLLSTRVE----ESGEHVILGTGELYLDCVMHDLRKMYSEIDIKVADPVVAFCETVVETSS 674
            .|...||.|.::    |:||..::..||::|...:.||..: ..:|:.|::|:|.|.|||:|.|.
 Worm   497 LKLLALLDTSLKVMELENGELAMVTAGEVHLQKCIKDLNDL-GLVDLDVSEPIVPFMETVIEDSV 560

  Fly   675 L----------KC-FAETPNKKNKIT----MISEPLEK--GLAEDIENG---------------T 707
            |          :| ..|....|.::.    .:.|.|:|  .|...|..|               :
 Worm   561 LSAPQIIEQETECRIREALYIKLRVVPLGDAVVELLDKNSSLISSIRRGEADQTEIDEFQKRFTS 625

  Fly   708 VCI--------NWNKKRIGEFFQVNYDWDLLAARSIWAFGPDSTGPNILVDDTLPSEVDKNLLTA 764
            ||:        :|..::..|..:...|       .||||||:....|||.:         |:...
 Worm   626 VCLETLPTLKGSWWFRKPKEVIESMID-------QIWAFGPERARANILFN---------NVQNY 674

  Fly   765 VKDSI---------------VQGFQWGTREGPLCEEPIRNVKFKI-------LDGVIANEALHRG 807
            .:||:               |.||:.....||||.|.:..:...:       .||.|        
 Worm   675 DRDSVWRKTEFGVRRYDQALVAGFELFCNTGPLCNEIMHGIAVIVEEWNVDEEDGAI-------- 731

  Fly   808 GGQIIPTARRVAYSAFLMATPRLMEPYLFVEVQAPADCVSAVYTVLARRRGHVTQDAPVSGSPIY 872
            |||::...:....:|......||:.......|...:..:..|:.||::|:..|..:.....:.::
 Worm   732 GGQMMTAIKASCSAAAKKLALRLVAAMYRCTVTTASQALGKVHAVLSQRKSKVLSEDINEATNLF 796

  Fly   873 TIKAFIPAIDSFGFETDLRTHTQGQAFCLSVFHHWQIVPGDPLDKSIIIRPLEP-----QQASHL 932
            .:.:.:|.::||.|...||..|.|.|.....|.|||::..||......:..:|.     ...:| 
 Worm   797 EVVSLMPVVESFSFCDQLRKFTSGMASAQLQFSHWQVIDEDPYWTPSTLEEIEEFGLKGDSPNH- 860

  Fly   933 AREFMIKTRRRKGL-SEDVSI 952
            ||.:|...|||||| :||:.:
 Worm   861 ARGYMDAVRRRKGLPTEDLIV 881

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4849NP_651605.1 EFTUD2 4..111 CDD:292623
PTZ00416 115..957 CDD:240409 236/931 (25%)
Snu114p 132..340 CDD:206730 78/221 (35%)
Translation_Factor_II_like 477..568 CDD:295476 21/96 (22%)
snRNP_III 589..660 CDD:293921 19/74 (26%)
EF2_IV_snRNP 660..837 CDD:238840 52/238 (22%)
eEF2_C_snRNP 832..911 CDD:239765 19/78 (24%)
K10C3.5NP_001021564.1 FusA 18..874 CDD:357662 232/922 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D140796at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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