DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4884 and C47B2.9

DIOPT Version :10

Sequence 1:NP_651604.1 Gene:CG4884 / 43357 FlyBaseID:FBgn0039565 Length:189 Species:Drosophila melanogaster
Sequence 2:NP_493277.2 Gene:C47B2.9 / 173173 WormBaseID:WBGene00008134 Length:153 Species:Caenorhabditis elegans


Alignment Length:182 Identity:46/182 - (25%)
Similarity:79/182 - (43%) Gaps:39/182 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MLRTFRQIARLGRSLRTPFPSKSLPKLSTTLELQAPVHTSASAWKYDKK----SSRASDDLD-SD 60
            ||...|.|:|     ||         |:||..|            ::||    |||....:| .|
 Worm     1 MLTAVRPISR-----RT---------LTTTSAL------------FNKKKPTSSSRGGSHVDVGD 39

  Fly    61 DEDDEDFKDERDSKVVKT-KVNSLRADLLLKAGLGMARNKVELNFYESKIRVNGKKLPKKSAQLE 124
            |...:|:|       :|| :..|.|.|..:....|.:.::|.....:.|:|||.:...||:..:.
 Worm    40 DGLPKDYK-------LKTLRAGSRRLDTFVNRATGQSSSEVVKLIMQGKVRVNEEVYTKKAYNVC 97

  Fly   125 VGDEIDVIRGFSQSNPSHLVVARVSILSVSEREEGLSVHLRRYKSLLVENYR 176
            ..|.:::.:.....|.:...|.|..|:|....|:|.::.::.:|:.|.:|:|
 Worm    98 QEDVVEIWKSPFADNAALANVERTEIVSYEVTEQGYNIEVKSWKNFLSDNWR 149

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4884NP_651604.1 None
C47B2.9NP_493277.2 S4 56..102 CDD:396182 11/45 (24%)

Return to query results.
Submit another query.