DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Nep7 and Mmel1

DIOPT Version :9

Sequence 1:NP_651603.1 Gene:Nep7 / 43356 FlyBaseID:FBgn0039564 Length:717 Species:Drosophila melanogaster
Sequence 2:NP_001101467.2 Gene:Mmel1 / 313755 RGDID:1309299 Length:774 Species:Rattus norvegicus


Alignment Length:770 Identity:210/770 - (27%)
Similarity:337/770 - (43%) Gaps:152/770 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 RSIGDESHENAITDETADYLRSHGAMMKSYMNFSVDPCDDFYEFACGNW-KNVKTPRQSPHRRSN 95
            |.:.|.|.::.|....:..:.:  |.:...|:.|..|||:||::|||.| ::...|  ..:.|.:
  Rat    73 RVLRDSSQKSDICTTPSCVIAA--ARILQNMDQSKKPCDNFYQYACGGWLRHHVIP--ETNSRYS 133

  Fly    96 ILDISYTLMDVTEQLLTRTKLAEALNVSAELLVAQRFYNSCLAAELFPRPAADPAYLSVIRSLGG 160
            :.||   |.|..|.:|.......::.....:..|:..|.||:...:..:..::| .|:|:..:||
  Rat   134 VFDI---LRDELEVILKGVLEDSSVQHRPAVEKAKTLYRSCMNQSVIEKRDSEP-LLNVLDMIGG 194

  Fly   161 FPAVDRDAWNASSFSWFNMSAHL----SNYGVRSLI------HEEILPQHPFNPYFKLPELGFDH 215
            :| |..|.||.:....:.:...|    |.:..|.||      .::...:|..  |...|.||.  
  Rat   195 WP-VAMDKWNETMGPKWELERQLAVLNSQFNRRVLIDLFIWNDDQNSSRHVI--YIDQPTLGM-- 254

  Fly   216 VVHTAHVANTSSRAYQLNE--HRMR-GYLK-----------------EYNLTKDEISAVIEGVFA 260
                      .||.|...|  ||:| .||:                 |.:|.::|::.|      
  Rat   255 ----------PSREYYFKEDSHRVREAYLQFMTSVATMLRRDLNLPGETDLVQEEMAQV------ 303

  Fly   261 FWSEALSIEDKF-------ESDRDKCDL-----LSEIEEVPRFG----QWRSYY----------- 298
                 |.:|...       |...|...|     |.|::|  |||    .|..:.           
  Rat   304 -----LHLETHLANATVPQEKRHDVTALYHRMGLEELQE--RFGLKGFNWTLFIQNVLSSVQVEL 361

  Fly   299 ----EIAWNGIDFYNGSSGGEFCDFYYVELDKVCAKHTEAVANYLAMRFLY----RMDDKLKEPK 355
                |:...||.:.....  |..|.:          ..:.:.|||..|.:.    .:..:.||.:
  Rat   362 LPNEEVVVYGIPYLENLE--EIIDVF----------PAQTLQNYLVWRLVLDRIGSLSQRFKEAR 414

  Fly   356 -----------QPEDQKVNCLMIVQMTLPNLFNRLYMAEHFTDEKHSEISDMVTEMRKAQRQILE 409
                       ..|.:...|:..|...:.:....||:...|:.:..|.:|:::.::|......|:
  Rat   415 VDYRKALYGTTMEEVRWRECVSYVNSNMESAVGSLYIKRAFSKDSKSIVSELIEKIRSVFVDNLD 479

  Fly   410 SVEWLDAETRAEALSKEAGITPVIG--SYKNEELSDTLIREINNLTIVEGSYAQS-LINLRVLGT 471
            .:.|:|.|::.:|..|...|...||  .|..|:.:..|..|.::||..|..|.:: |.||:    
  Rat   480 ELNWMDEESKKKAQEKALNIREQIGYPDYILEDNNRHLDEEYSSLTFSEDLYFENGLQNLK---- 540

  Fly   472 YLHRYAGLHADEL-PKDTKPLTLLVGMQVNAFYYNLDNSVYVMAGVLHPPAYHRSWPDSLKFGTI 535
               ..|.....:| .|..:.|.::....|||||....|.:...||:|.||.:.:..|.:|.||.|
  Rat   541 ---NNAQRSLKKLREKVDQNLWIIGAAVVNAFYSPNRNLIVFPAGILQPPFFSKDQPQALNFGGI 602

  Fly   536 GYLIGHELTHGFDTEGSSFDSAGEVRDWWSRKSEAVFQERAQCYVDYFNQYLIPEI--NQTIRGN 598
            |.:||||:|||||..|.:||..|.:.||||..|...|::::||.:..::.:.. |:  ||.:.|.
  Rat   603 GMVIGHEITHGFDDNGRNFDKNGNMLDWWSNFSARHFRQQSQCMIYQYSNFSW-ELADNQNVNGF 666

  Fly   599 ETRDENIADAGGLRAALTGYRNHMKQLQRSGADGETLAHKNEQMPGLDLSPEQLFFVGFAQLWCA 663
            .|..|||||.||:|.|   |:.:::.|...|.|        :::|||:|:..||||:.:||:||.
  Rat   667 STLGENIADNGGVRQA---YKAYLQWLAEGGRD--------QRLPGLNLTYAQLFFINYAQVWCG 720

  Fly   664 DYEPEHYWEEL-TGAHTVDKYRVLGAVSNNDDFAEVYKCPLGSPMHPKAESCRMW 717
            .|.||...:.: |..|:..||||||::.|...|:|.:.||.|||||| ...||:|
  Rat   721 SYRPEFAIQSIKTDVHSPLKYRVLGSLQNLPGFSEAFHCPRGSPMHP-MNRCRIW 774

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nep7NP_651603.1 PepO 60..717 CDD:226118 204/740 (28%)
M13 66..715 CDD:189000 200/732 (27%)
Mmel1NP_001101467.2 Stop-transfer sequence. /evidence=ECO:0000255 14..21
M13 106..772 CDD:341056 200/731 (27%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166344523
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3590
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D282463at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11733
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.850

Return to query results.
Submit another query.