DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Gp93 and SHD

DIOPT Version :9

Sequence 1:NP_651601.1 Gene:Gp93 / 43354 FlyBaseID:FBgn0039562 Length:787 Species:Drosophila melanogaster
Sequence 2:NP_194150.1 Gene:SHD / 828520 AraportID:AT4G24190 Length:823 Species:Arabidopsis thaliana


Alignment Length:845 Identity:383/845 - (45%)
Similarity:541/845 - (64%) Gaps:80/845 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MKYFLLVGLLLLAGI-------------NQIAADDEAATTETIDLDLGSFKEGSRTDAETLKREE 52
            |:...||.:|.|..:             |...:.|:......::..:|. ..|..||::.:.||.
plant     1 MRKRTLVSVLFLFSLLFLLPDQGRKLHANAEESSDDVTDPPKVEEKIGG-HGGLSTDSDVVHRES 64

  Fly    53 EAIQLDGLNVAQLKEIREKAKKFTFQTEVNRMMKLIINSLYRNKEIFLRELISNASDAIDKIRLL 117
            |::        ..|.:|..|:||.||.||:|:|.:||||||.||:|||||||||||||:||||.|
plant    65 ESM--------SKKTLRSNAEKFEFQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIRFL 121

  Fly   118 ALSNSKEL--ETNPELHIRIKADKENKALHIMDSGIGMTHQDLINNLGTIAKSGTADFLAKMQDP 180
            ||::...|  ....:|.|:||.||..|.|.|.|.|||||.:|||.||||||||||:.|:.|||  
plant   122 ALTDKDVLGEGDTAKLEIQIKLDKAKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQ-- 184

  Fly   181 SKSEGLDMNDMIGQFGVGFYSAFLVADRVVVTTKHNDDKQYIWESDAN-SFSITEDPRGDTLKRG 244
              |.| |:| :|||||||||||:||||.:.|.:|||||.||:|||.|| .|:::||...:.|.||
plant   185 --SSG-DLN-LIGQFGVGFYSAYLVADYIEVISKHNDDSQYVWESKANGKFAVSEDTWNEPLGRG 245

  Fly   245 SVISLYLKEEAQDFLEEDTVRELIRKYSQFINFPIRMWSSKTVEEEVPVEEEAKPEKSEDDVEDE 309
            :.|.|:|::||.::|||..::||:::||:||||||.:|:||.||.||||||:...::..:....|
plant   246 TEIRLHLRDEAGEYLEESKLKELVKRYSEFINFPISLWASKEVETEVPVEEDESADEETETTSTE 310

  Fly   310 DAKVEEAEDE----KPKTKKVSKTTWDWTLINDSKPIWTRKPAEVTEDEYTSFYKSLTKD--SSE 368
            :.|.|:||:|    |.|||||.:|.::|.|:||.|.||.|.|.||||:|||.||.||:||  ..:
plant   311 EEKEEDAEEEDGEKKQKTKKVKETVYEWELLNDVKAIWLRSPKEVTEEEYTKFYHSLSKDFTDEK 375

  Fly   369 PLTQTHFIAEGEVTFKSLLYVPKVQPSESF-NRYGTKSDNIKLYVRRVFITDEFNDMMPNYLSFI 432
            |:..:||.|||:|.||::||||...|.:.: :.|.:...|:|||||||||:|||::::|.||||:
plant   376 PMAWSHFNAEGDVEFKAVLYVPPKAPHDLYESYYNSNKANLKLYVRRVFISDEFDELLPKYLSFL 440

  Fly   433 RGVVDSDDLPLNVSRETLQQHKLIKVIKKKLVRKVLDMLKKIDKE-------------------- 477
            :|:||||.||||||||.||||..:|.|||||:||.|||::|:.:|                    
plant   441 KGLVDSDTLPLNVSREMLQQHSSLKTIKKKLIRKALDMIRKLAEEDPDEIHDDEKKDVEKSGEND 505

  Fly   478 ----AYEKFWKEFSTNIKLGVMEDPSNRSRLAKLLRFQTSNGKG-VTSLAEYKERMKAKQEHIYY 537
                .|.|||.||..::|||::||.:||:||||||||:|:...| :|||.:|.:|||..|:.|:|
plant   506 EKKGQYTKFWNEFGKSVKLGIIEDAANRNRLAKLLRFETTKSDGKLTSLDQYIKRMKKSQKDIFY 570

  Fly   538 IAGANRAEVEKSPFVERLLSKGYEVLYLVEAVDEYCISALPEFDGKKFQNVAKEGFQLNESEKSK 602
            |.|:::.::|||||:|||:.|||||::..:.||||.:..|.:::.||||||:|||.::.:..|.|
plant   571 ITGSSKEQLEKSPFLERLIKKGYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKVGKDSKDK 635

  Fly   603 KNFESLKSTFEPLVKWLNDVALKDQISKAQVSERLSNSPCALVAGVFGWTGNMERLAMSNAHQKS 667
            :    ||..|:.|.||.......:.:...::|.||:::||.:|...|||:.||||:..|   |..
plant   636 E----LKEAFKELTKWWKGNLASENVDDVKISNRLADTPCVVVTSKFGWSANMERIMQS---QTL 693

  Fly   668 DDPQRTYYLNQKKTLEINPRHPLMRELLRRVEADEADDTAKDMAVMMFRTATLRSGYMLQETSQF 732
            .|..:..|:..|:.||||||||:::||..|:.:|..|::.|:.|.:|::||.:.||::|.:...|
plant   694 SDANKQAYMRGKRVLEINPRHPIIKELKDRIASDPEDESVKETAQLMYQTALIESGFILTDPKDF 758

  Fly   733 ADSIEQMMRQTLGVS----QDEQVEFDEE-EEDDAEETATGSQESG-NADDEEEEQQH----DEL 787
            |..|...::..|.:|    .||::|..|| |..:|.||.:.....| |.:.|..|||.    |||
plant   759 AARIYNSVKSGLNISPDAVADEEIEAAEEPETSEATETKSDDLAGGLNIEAEPVEQQEENTKDEL 823

  Fly   788  787
            plant   824  823

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gp93NP_651601.1 PRK05218 74..745 CDD:235366 346/705 (49%)
HATPase_c 97..216 CDD:238030 74/120 (62%)
HSP90 257..748 CDD:278607 236/526 (45%)
SHDNP_194150.1 PRK05218 74..763 CDD:235366 346/701 (49%)
HATPase_c 104..253 CDD:280651 91/154 (59%)
HSP90 258..775 CDD:278607 236/523 (45%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 482 1.000 Domainoid score I85
eggNOG 1 0.900 - - E1_COG0326
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H2476
Inparanoid 1 1.050 695 1.000 Inparanoid score I136
OMA 1 1.010 - - QHG54632
OrthoDB 1 1.010 - - D924636at2759
OrthoFinder 1 1.000 - - FOG0000295
OrthoInspector 1 1.000 - - oto2936
orthoMCL 1 0.900 - - OOG6_100204
Panther 1 1.100 - - LDO PTHR11528
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X234
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1514.840

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