DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gp93 and Trap1

DIOPT Version :9

Sequence 1:NP_651601.1 Gene:Gp93 / 43354 FlyBaseID:FBgn0039562 Length:787 Species:Drosophila melanogaster
Sequence 2:NP_001034090.1 Gene:Trap1 / 287069 RGDID:1359733 Length:706 Species:Rattus norvegicus


Alignment Length:715 Identity:216/715 - (30%)
Similarity:368/715 - (51%) Gaps:127/715 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 TDAETLKREEEAIQLDGLNVAQLKEIREKAKKFTFQTEVNRMMKLIINSLYRNKEIFLRELISNA 107
            |.|...|:||....:    ::..:.::....|..||.|..:::.::..|||..||:|:|||||||
  Rat    62 TQAAEDKKEEALHSI----ISNTEAVQGSVSKHEFQAETKKLLDIVARSLYSEKEVFIRELISNA 122

  Fly   108 SDAIDKIRLLALSNSKELETNPELHIRIKADKENKALHIMDSGIGMTHQDLINNLGTIAKSGTAD 172
            |||::|:|...:...:.|   ||:.|.::.|.|...:.|.|:|||||.::|::||||||:||:..
  Rat   123 SDALEKLRHKRVCEGQVL---PEMEIHLQTDAEKGTITIQDTGIGMTKEELVSNLGTIARSGSKA 184

  Fly   173 FLAKMQDPSKSEGLDMNDMIGQFGVGFYSAFLVADRVVVTTK--HNDDKQYIWESDANS-FSITE 234
            ||..:|..:::.    :.:||||||||||||:|||:|.|.::  ..:...|.|.||.:. |.|.|
  Rat   185 FLEALQHQAETS----SRIIGQFGVGFYSAFMVADKVEVYSRPAAPESPGYQWLSDGSGVFEIAE 245

  Fly   235 DPRGDTLKRGSVISLYLKEEAQDFLEEDTVRELIRKYSQFINFPIRMWSSKTVEEEVPVEEEAKP 299
               ...::.|:.|.::||.:.:||..|..|::::.|||.|::||:.:...:              
  Rat   246 ---ASGVRPGTKIIIHLKSDCKDFANESRVQDVVTKYSNFVSFPLYLNGRR-------------- 293

  Fly   300 EKSEDDVEDEDAKVEEAEDEKPKTKKVSKTTWDWTLINDSKPIWTRKPAEVTEDEYTSFYKSLTK 364
                                                ||..:.||...|.:::|.::..||:.:.:
  Rat   294 ------------------------------------INTLQAIWMMDPKDISEFQHEEFYRYIAQ 322

  Fly   365 DSSEPLTQTHFIAEGEVTFKSLLYVPKVQPSESFNRYGTKSDNIKLYVRRVFITDEFNDMMPNYL 429
            ...:|....|:..:..:..:|:.|||:::|| .|:.......::.||.|:|.|..:..|::|.:|
  Rat   323 AYDKPRFILHYKTDAPLNIRSIFYVPEMKPS-MFDVSRELGSSVALYSRKVLIQTKATDILPKWL 386

  Fly   430 SFIRGVVDSDDLPLNVSRETLQQHKLIK----VIKKKLVRKVLDMLKKIDKEAYEKFWKEFSTNI 490
            .|:||||||:|:|||:|||.||:..||:    |::::|::..:|..|| |.|.|.||::::...:
  Rat   387 RFVRGVVDSEDIPLNLSRELLQESALIRKLRDVLQQRLIKFFIDQSKK-DAEKYAKFFEDYGLFM 450

  Fly   491 KLGVM--EDPSNRSRLAKLLRFQTS---NGKGVTSLAEYKERMKAKQEHIYYIAGANRAEVEKSP 550
            :.|::  .:...:..:|||||:::|   .|: :|||::|..||:|...:|||:...||...|.||
  Rat   451 REGIVTTAEQDIKEDIAKLLRYESSALPAGQ-LTSLSDYASRMQAGTRNIYYLCAPNRHLAEHSP 514

  Fly   551 FVERLLSKGYEVLYLVEAVDEYCISALPEFDGK-----------------KFQNVAKEGFQLNES 598
            :.|.:..|..|||:..|..||..:..|.|||.|                 ||::.:..|.:|:|.
  Rat   515 YYEAMKQKQTEVLFCYEQFDELTLLHLREFDKKKLISVETDIVVDHYKEEKFEDTSPAGERLSEK 579

  Fly   599 EKSKKNFESLKSTFEPLVKWLNDVALKDQISKAQVSERLSNSPCALVAGVFGWTGN---MERLAM 660
            |.            |.|:.|:.: ||..:::..:|:.||...|..:.....|...:   |::||.
  Rat   580 ET------------EELMAWMRN-ALGSRVTNVKVTFRLDTHPAMVTVLEMGAARHFLRMQQLAK 631

  Fly   661 SNAHQKSDDPQRTYYLNQKKTLEINPRHPLMREL--LRRVEADEADDTAKDMAVMMFRTATLRSG 723
            :       ..:|...|  :.||||||||.|:::|  ||..|    .:.|:.:...::..|.:.:|
  Rat   632 T-------QEERAQLL--QPTLEINPRHTLIKKLNQLRERE----PELAQLLVDQIYENAMIAAG 683

  Fly   724  723
              Rat   684  683

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gp93NP_651601.1 PRK05218 74..745 CDD:235366 211/684 (31%)
HATPase_c 97..216 CDD:238030 56/120 (47%)
HSP90 257..748 CDD:278607 136/498 (27%)
Trap1NP_001034090.1 PRK05218 89..704 CDD:235366 211/684 (31%)
HATPase_c 114..223 CDD:238030 55/115 (48%)
HSP90 265..703 CDD:278607 136/498 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0326
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D924636at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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