DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Gp93 and trap1

DIOPT Version :9

Sequence 1:NP_651601.1 Gene:Gp93 / 43354 FlyBaseID:FBgn0039562 Length:787 Species:Drosophila melanogaster
Sequence 2:XP_002932506.1 Gene:trap1 / 100492593 XenbaseID:XB-GENE-999249 Length:709 Species:Xenopus tropicalis


Alignment Length:706 Identity:216/706 - (30%)
Similarity:375/706 - (53%) Gaps:101/706 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 GSRTDAETLKREEEAIQLDGLN--VAQLKEIREKAKKFTFQTEVNRMMKLIINSLYRNKEIFLRE 102
            |.|...:..:.:||.|    |:  ::..:.::..|.|..||.|..:::.::..|||..||:|:||
 Frog    60 GRRYTTQAAENKEEEI----LHKIISDTENVQGSASKHEFQAETKKLLDIVARSLYSEKEVFIRE 120

  Fly   103 LISNASDAIDKIRLLALSNSKELETNPELHIRIKADKENKALHIMDSGIGMTHQDLINNLGTIAK 167
            ||||.|||::|:|...|:....|   ||:.|.::.|.:...|.|.|:|:|||..|||:||||||:
 Frog   121 LISNGSDALEKLRHNHLAQGSAL---PEMEIHLQTDADKGTLTIQDTGVGMTRDDLISNLGTIAR 182

  Fly   168 SGTADFLAKMQDPSKSEGLDMNDMIGQFGVGFYSAFLVADRVVVTTKHNDDKQ--YIWESDANS- 229
            ||:..||..:|:.:.|.    :.:||||||||||||:|||:|||.::.:::..  |.|.||.:. 
 Frog   183 SGSKAFLEALQNQADSS----SKIIGQFGVGFYSAFMVADKVVVYSQSSEEGSTGYCWSSDGSGV 243

  Fly   230 FSITEDPRGDTLKRGSVISLYLKEEAQDFLEEDTVRELIRKYSQFINFPIRMWSSKTVEEEVPVE 294
            |.:.|   ...::.|:.:.::||::.::|..||.|:|::.|||.|::||:.:...:         
 Frog   244 FELVE---ASGVRPGTKVVIHLKDDCKEFANEDRVKEVVTKYSNFVSFPLYLNGKR--------- 296

  Fly   295 EEAKPEKSEDDVEDEDAKVEEAEDEKPKTKKVSKTTWDWTLINDSKPIWTRKPAEVTEDEYTSFY 359
                                                     :|..:.:|...|.|:.|.::..||
 Frog   297 -----------------------------------------MNTLQALWMMDPKEIGEWQHEEFY 320

  Fly   360 KSLTKDSSEPLTQTHFIAEGEVTFKSLLYVPKVQPSESFNRYGTKSDNIKLYVRRVFITDEFNDM 424
            :.:.:...:|....|:.|:..:..:|:.|||:::|| .|:.......::.||.|:|.|..:..|:
 Frog   321 RFIAQAYDKPRYMLHYKADAPLNIRSIFYVPEMKPS-MFDVSREMGSSVALYSRKVLIQTKAADI 384

  Fly   425 MPNYLSFIRGVVDSDDLPLNVSRETLQQHKLIK----VIKKKLVRKVLDMLKKIDKEAYEKFWKE 485
            :|.:|.|:||||||:|:|||:|||.||:..||:    |::::|::..:|..|| |.|.|.||:::
 Frog   385 LPKWLRFLRGVVDSEDIPLNLSRELLQESVLIRKLRDVLQRRLIKFFIDQSKK-DPEKYAKFFED 448

  Fly   486 FSTNIKLGVM--EDPSNRSRLAKLLRFQTSN---GKGVTSLAEYKERMKAKQEHIYYIAGANRAE 545
            :...::.|::  .:...:..:||||||::|:   |: .|||.||..||:....:|||:...||..
 Frog   449 YGLFMREGIVTTAEQEVKEDIAKLLRFESSSLPEGQ-QTSLTEYASRMQPGTRNIYYLCAPNRHL 512

  Fly   546 VEKSPFVERLLSKGYEVLYLVEAVDEYCISALPEFDGKKF----QNVAKEGFQLNESEKSKKNFE 606
            .|.||:.|.:..|..|||:..|..||..:..|.|||.||.    .::..:.::.::.|:|....|
 Frog   513 AEHSPYYEAMKKKQTEVLFCYEQFDELTMLHLREFDKKKLISVETDIVVDHYKEDKFEESIPASE 577

  Fly   607 SL-KSTFEPLVKWLNDVALKDQISKAQVSERLSNSPCALVAGVFGWTGNM---ERLAMSNAHQKS 667
            .| :...|.|:.|:.: .|..:|:..:|:.||...|..:.....|...:.   ::||.::     
 Frog   578 RLSEKEAEDLMAWMRN-GLGTRITNVKVTPRLDTHPAMITVLEMGAARHFLRTQQLAKTS----- 636

  Fly   668 DDPQRTYYLNQKKTLEINPRHPLMRELLRRVEADEADDTAKDMAVMMFRTATLRSG 723
              .:|...|  :.|||||..|||:::|.:..:.::  :.||.:...::..|.:.:|
 Frog   637 --EERAQIL--QPTLEINTGHPLIKKLWQLKDGEQ--ELAKLLLDQIYENAMIAAG 686

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gp93NP_651601.1 PRK05218 74..745 CDD:235366 209/670 (31%)
HATPase_c 97..216 CDD:238030 59/118 (50%)
HSP90 257..748 CDD:278607 133/484 (27%)
trap1XP_002932506.1 PRK05218 92..707 CDD:235366 209/670 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D924636at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

Return to query results.
Submit another query.