DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mfrn and ucp1

DIOPT Version :10

Sequence 1:NP_651600.1 Gene:mfrn / 43353 FlyBaseID:FBgn0039561 Length:379 Species:Drosophila melanogaster
Sequence 2:NP_955817.1 Gene:ucp1 / 83908 ZFINID:ZDB-GENE-010503-1 Length:309 Species:Danio rerio


Alignment Length:273 Identity:63/273 - (23%)
Similarity:111/273 - (40%) Gaps:37/273 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 PTTSVGVNMTAGAIAGVLEHVVMYPLDSVKTRMQ-----SLSPPTKNM---NIVSTLRTMITREG 66
            |..:|.| ::||..|.:.: :|.:|||:.|.|:|     :::...|.:   .:..|:.||:..||
Zfish    11 PPLTVKV-LSAGTAACIAD-LVTFPLDTAKVRLQIQGEKAVTGAAKGIRYKGVFGTISTMMRTEG 73

  Fly    67 LLRPIRGASAVVLGAGPAHSLYFAA-----YEMTKELTAK-----FTSVRNLNYVISGAVATLIH 121
            ......|     |.||....:.||:     |:..|....:     ..:||.|....:||:|.   
Zfish    74 PRSLYNG-----LVAGLQRQMAFASIRIGLYDNVKSFYTRGKDNPNVAVRILAGCTTGAMAV--- 130

  Fly   122 DAISSPTDVIKQR------MQMYNSPYTSVVSCVRDIYKREGFKAFYRAYGTQLVMNLPYQTIHF 180
             :::.||||:|.|      :|.....|...:...|.|::.||.:..::.....:..|........
Zfish   131 -SMAQPTDVVKVRFQAQMNLQGVGRRYNGTMQAYRQIFQLEGLRGLWKGTLPNITRNALVNCTEL 194

  Fly   181 TTYEFFQNKMNLER--KYNPPVHMAAGAAAGACAAAVTTPLDVIKTLLNTQETGLTRGMIEASRK 243
            .:|:..:..:...|  ..|.|.|..:...||.....:.:|:||:||.......|........:..
Zfish   195 VSYDLIKEAILKHRLLSDNLPCHFVSAFGAGFITTVIASPVDVVKTRYMNSPPGQYSSSTNCAWT 259

  Fly   244 IYHMAGPLGFFRG 256
            :....||..|::|
Zfish   260 MLTKEGPTAFYKG 272

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mfrnNP_651600.1 PTZ00168 17..280 CDD:185494 60/266 (23%)
ucp1NP_955817.1 Mito_carr 10..110 CDD:395101 27/105 (26%)
Mito_carr 111..208 CDD:395101 20/100 (20%)
Mito_carr 213..299 CDD:395101 15/60 (25%)

Return to query results.
Submit another query.