DRSC/TRiP Functional Genomics Resources

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Protein Alignment mfrn and Slc25a28

DIOPT Version :9

Sequence 1:NP_651600.1 Gene:mfrn / 43353 FlyBaseID:FBgn0039561 Length:379 Species:Drosophila melanogaster
Sequence 2:XP_006231629.1 Gene:Slc25a28 / 688811 RGDID:1584155 Length:399 Species:Rattus norvegicus


Alignment Length:327 Identity:156/327 - (47%)
Similarity:194/327 - (59%) Gaps:49/327 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 DYESLPT-TSVGVNMTAGAIAGVLEHVVMYPLDSVKTRMQSL--SPPTKNMNIVSTLRTMITREG 66
            :||:||. .:|..:|.|||:||:|||.||||:|.||||||||  .|..:..|::..|..:|..||
  Rat    62 EYEALPAGATVTTHMVAGAVAGILEHCVMYPIDCVKTRMQSLQPDPAARYRNVLEALWRIIRTEG 126

  Fly    67 LLRPIRGASAVVLGAGPAHSLYFAAYEMTKE--------------------------------LT 99
            |.||:||.:....||||||:||||.||..|:                                |.
  Rat   127 LWRPMRGLNVTATGAGPAHALYFACYEKLKKTLSDVIHPGGNSHIANGIEPPRAGPHFPNSLGLA 191

  Fly   100 AKFTS------VRNLNYVISGAVATLIHDAISSPTDVIKQRMQMYNSPYTSVVSCVRDIYKREGF 158
            |...|      ..:|....:|.||||:|||..:|.:|:|||||||||||..|..|||.:::.||.
  Rat   192 AVSASQPRMVWSGSLGLGAAGCVATLLHDAAMNPAEVVKQRMQMYNSPYHRVTDCVRAVWQNEGA 256

  Fly   159 KAFYRAYGTQLVMNLPYQTIHFTTYEFFQNKMNLERKYNPPVHMAAGAAAGACAAAVTTPLDVIK 223
            .||||:|.|||.||:|:|.|||.||||.|...|.:|:|||..|:..||.|||.|||.||||||.|
  Rat   257 GAFYRSYTTQLTMNVPFQAIHFMTYEFLQEHFNPQRRYNPSSHVLCGACAGAVAAAATTPLDVCK 321

  Fly   224 TLLNTQE--------TGLTRGMIEASRKIYHMAGPLGFFRGTTARVLYSMPATAICWSTYEFFKF 280
            |||||||        ||...||..|.|.:|.:.|...:|||..|||:|.:|:|||.||.|||||:
  Rat   322 TLLNTQESLALSSNITGHITGMANAFRTVYQVGGVTAYFRGVQARVIYQIPSTAIAWSVYEFFKY 386

  Fly   281 YL 282
            .:
  Rat   387 LI 388

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mfrnNP_651600.1 Mito_carr 13..98 CDD:278578 47/118 (40%)
PTZ00168 17..280 CDD:185494 150/310 (48%)
Mito_carr 107..190 CDD:278578 48/82 (59%)
Mito_carr <215..282 CDD:278578 40/74 (54%)
Slc25a28XP_006231629.1 Mito_carr 71..161 CDD:278578 47/89 (53%)
PTZ00168 75..386 CDD:185494 150/310 (48%)
Mito_carr 202..288 CDD:278578 48/85 (56%)
Mito_carr <314..391 CDD:278578 40/75 (53%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 108 1.000 Domainoid score I6307
eggNOG 1 0.900 - - E1_KOG0760
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 307 1.000 Inparanoid score I2547
OMA 1 1.010 - - QHG53563
OrthoDB 1 1.010 - - D1056670at2759
OrthoFinder 1 1.000 - - FOG0001524
OrthoInspector 1 1.000 - - otm45620
orthoMCL 1 0.900 - - OOG6_101882
Panther 1 1.100 - - LDO PTHR45758
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X1097
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1413.840

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