DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mfrn and nars1

DIOPT Version :9

Sequence 1:NP_651600.1 Gene:mfrn / 43353 FlyBaseID:FBgn0039561 Length:379 Species:Drosophila melanogaster
Sequence 2:XP_696748.4 Gene:nars1 / 568332 ZFINID:ZDB-GENE-030131-1016 Length:603 Species:Danio rerio


Alignment Length:43 Identity:12/43 - (27%)
Similarity:17/43 - (39%) Gaps:4/43 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   331 TLHSAPTSVNASGAIKTVCE----LSTRPAGPTINLHTRHTDV 369
            |:...|....|.|..:..|:    :...|||...||....:||
Zfish   239 TVKPVPEGKQAPGGHELHCDFWELVGLAPAGGADNLLNEESDV 281

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mfrnNP_651600.1 Mito_carr 13..98 CDD:278578
PTZ00168 17..280 CDD:185494
Mito_carr 107..190 CDD:278578
Mito_carr <215..282 CDD:278578
nars1XP_696748.4 AsnS 168..603 CDD:223096 12/43 (28%)
AsnRS_cyto_like_N 182..264 CDD:239818 5/24 (21%)
AsxRS_core 280..599 CDD:238399 2/2 (100%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1056670at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.010

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