DRSC/TRiP Functional Genomics Resources

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Protein Alignment mfrn and CG5805

DIOPT Version :9

Sequence 1:NP_651600.1 Gene:mfrn / 43353 FlyBaseID:FBgn0039561 Length:379 Species:Drosophila melanogaster
Sequence 2:NP_001287513.1 Gene:CG5805 / 42950 FlyBaseID:FBgn0039223 Length:339 Species:Drosophila melanogaster


Alignment Length:298 Identity:66/298 - (22%)
Similarity:118/298 - (39%) Gaps:52/298 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 MYPLDSVKTRMQSLSPPTKNMNIVSTLRTMITREGLLRPIRG--ASAVVLGAGPAHSLYFAAYEM 94
            ::||..:||::|..........:|.....:...||:....||  .|:|.:.:|   ..|.:.||.
  Fly    57 LFPLTVIKTQLQVQHKSDVYKGMVDCAMKIYRSEGVPGLYRGFWISSVQIVSG---VFYISTYEG 118

  Fly    95 TKELTAKFTSVRNLNYVISGAVATLIHDAISSPTDVIKQ-------------------------- 133
            .:.:.....:...:..:..|..|:|:...|..|.|||.|                          
  Fly   119 VRHVLNDLGAGHRMKALAGGGCASLVGQTIIVPFDVISQHAMVLGMSAHAGSKGDINPLGIKSWP 183

  Fly   134 -RMQMYNSPYTSVVSCVRDIYKREGFKAFYRAYGTQLVMNLPYQTIHFTTYEFFQNKMNLERKYN 197
             |.:::.|     :...|:|.:|:||:.|||.|...|:..:|...:.:..|..:|:::   .:..
  Fly   184 GRSRLHIS-----MDIGREIMRRDGFRGFYRGYTASLMAYVPNSAMWWAFYHLYQDEL---FRIC 240

  Fly   198 PP------VHMAAGAAAGACAAAVTTPLDVIKTLLNTQETGLTRGMIEASRKIYHMAGPLGFFRG 256
            |.      :...||:..|.....:|.|||:::..|......   .|..|.|:::.......||:|
  Fly   241 PVWVSHLFIQCVAGSLGGFTTTILTNPLDIVRARLQVHRLD---SMSVAFRELWQEEKLNCFFKG 302

  Fly   257 TTARVLYSMPATAICWSTYEFFKFYLCGLDADQYKSSI 294
            .:||::.|...:......||..|  ...:| :|||..|
  Fly   303 LSARLVQSAAFSFSIILGYETIK--RIAVD-EQYKHQI 337

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mfrnNP_651600.1 Mito_carr 13..98 CDD:278578 16/67 (24%)
PTZ00168 17..280 CDD:185494 60/282 (21%)
Mito_carr 107..190 CDD:278578 24/109 (22%)
Mito_carr <215..282 CDD:278578 17/66 (26%)
CG5805NP_001287513.1 Mito_carr 46..125 CDD:395101 16/70 (23%)
Mito_carr 132..238 CDD:395101 24/113 (21%)
Mito_carr 245..327 CDD:395101 20/86 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45441218
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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