DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mfrn and GC2

DIOPT Version :10

Sequence 1:NP_651600.1 Gene:mfrn / 43353 FlyBaseID:FBgn0039561 Length:379 Species:Drosophila melanogaster
Sequence 2:NP_731657.2 Gene:GC2 / 41449 FlyBaseID:FBgn0037970 Length:319 Species:Drosophila melanogaster


Alignment Length:288 Identity:62/288 - (21%)
Similarity:119/288 - (41%) Gaps:31/288 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 GAIAGVLEHVVMYPLDSVKTRM--QSLSPPTKNM--NIVSTLRTMITREGLLRPIRGASAVVLGA 81
            |.:||::....:||||.||||:  |::.|..:.|  :|....|..|..||.....||::..::..
  Fly    27 GGVAGIIGVACVYPLDMVKTRLQNQTIGPNGERMYTSIADCFRKTIASEGYFGMYRGSAVNIVLI 91

  Fly    82 GPAHSLYFAAYEMTKELTAKFTSVRNLN-YVISGAVATLIHDAISSPTDVIKQRMQMYNS----- 140
            .|..::...|.:..:...|....|..|: ..::|.:|.|....:::|.:::|.:||....     
  Fly    92 TPEKAIKLTANDFFRYHLASDDGVIPLSRATLAGGLAGLFQIVVTTPMELLKIQMQDAGRVAAAD 156

  Fly   141 -------PYTSVVSCVRDIYKREGFKAFYRAYGTQLVMNLPYQTIHFTTYEFFQNKMNLERKYNP 198
                   ...:.:...:.:.:..|....|:..|...|.::.:..::|....:..::.  .||.:.
  Fly   157 RAAGREVKTITALGLTKTLLRERGIFGLYKGVGATGVRDITFSMVYFPLMAWINDQG--PRKSDG 219

  Fly   199 PVH------MAAGAAAGACAAAVTTPLDVIKTLLNTQETGLTRGMIEASRKIYHMAGPLGFFRGT 257
            ...      :.||..:|..:|.:.||.||:||.|........:|:::...:.....|...||:|.
  Fly   220 SGEAVFYWSLIAGLLSGMTSAFMVTPFDVVKTRLQADGEKKFKGIMDCVNRTLKEEGISAFFKGG 284

  Fly   258 TARVLYSMPATAICWSTYEFFKFYLCGL 285
            ..|::...|...|..      .||..|:
  Fly   285 LCRIMVLAPLFGIAQ------MFYFLGV 306

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mfrnNP_651600.1 PTZ00168 17..280 CDD:185494 59/281 (21%)
GC2NP_731657.2 Mito_carr 16..106 CDD:395101 23/78 (29%)
Mito_carr 123..203 CDD:395101 11/79 (14%)
Mito_carr 228..302 CDD:395101 19/79 (24%)

Return to query results.
Submit another query.