DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mfrn and slc25a40

DIOPT Version :10

Sequence 1:NP_651600.1 Gene:mfrn / 43353 FlyBaseID:FBgn0039561 Length:379 Species:Drosophila melanogaster
Sequence 2:NP_989316.1 Gene:slc25a40 / 394941 XenbaseID:XB-GENE-1003942 Length:341 Species:Xenopus tropicalis


Alignment Length:325 Identity:83/325 - (25%)
Similarity:141/325 - (43%) Gaps:51/325 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 MTAGAIAGVLEHVVMYPLDSVKTRMQSLSPP-------------------TKNMNIVSTLRT--- 60
            |.|.::..:|....:.|||.||.|:|:.|.|                   ..|.|..:..|.   
 Frog    20 MIASSMGALLTSFFVTPLDVVKIRLQAQSKPFIKGKCFVYCNGLMDHLCLCTNGNGKAWYRAPGH 84

  Fly    61 ----------MITREGLLRPIRGASAVVLGAGPAHSLYFAAYEMTKELTAKFTSVR-NLNYVISG 114
                      :|..||:.....|....::.|.||..:||..|:..:::..:....| .:..:::|
 Frog    85 FRGTTDAFVQIIRNEGIKSLWSGLPPTLVMAVPATVIYFTCYDQLRDILIRSMPERAEIASLVAG 149

  Fly   115 AVATLIHDAISSPTDVIKQRMQMYNSPYTSVVSCVRDIYKREGFKAFYRAYGTQLVMNLPYQTIH 179
            |.|.|....:.||.::|:.:||.....|..:..|::....::|:.|.::.:|..::.::|:..::
 Frog   150 ATARLWSATLISPLELIRTKMQYRPLSYKELRQCIQSSVAKDGWLALWKGWGPTVLRDVPFSALY 214

  Fly   180 FTTYEFFQNKMNLERKYNP-----PVHMAAGAAAGACAAAVTTPLDVIKTLLNTQETG----LTR 235
            :..||..  |.:|.::||.     .:...|||.:|:.||.||.|.||:||.... |.|    .|.
 Frog   215 WHNYELV--KQSLCQRYNTLQPTFAISFTAGAVSGSIAAIVTLPFDVVKTRRQV-EVGELEMFTY 276

  Fly   236 GMIEAS------RKIYHMAGPLGFFRGTTARVLYSMPATAICWSTYEFFKFYLCGLDADQYKSSI 294
            ....:|      |.|....|..|.|.|...|::...||.||..|||||.|.:...|:.::...|:
 Frog   277 SQKRSSSTWKLMRAIVIENGFGGLFAGLIPRLIKVAPACAIMISTYEFGKSFFRKLNNERQLKSL 341

  Fly   295  294
             Frog   342  341

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mfrnNP_651600.1 PTZ00168 17..280 CDD:185494 80/309 (26%)
slc25a40NP_989316.1 Mito_carr 14..136 CDD:395101 25/115 (22%)
Solcar 1 14..132 25/111 (23%)
Solcar 2 140..224 19/85 (22%)
Mito_carr 143..225 CDD:395101 18/83 (22%)
Mito_carr 233..331 CDD:395101 34/98 (35%)
Solcar 3 234..328 34/94 (36%)

Return to query results.
Submit another query.