DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mfrn and slc25a39

DIOPT Version :10

Sequence 1:NP_651600.1 Gene:mfrn / 43353 FlyBaseID:FBgn0039561 Length:379 Species:Drosophila melanogaster
Sequence 2:NP_956780.1 Gene:slc25a39 / 393458 ZFINID:ZDB-GENE-040426-1250 Length:359 Species:Danio rerio


Alignment Length:353 Identity:86/353 - (24%)
Similarity:137/353 - (38%) Gaps:97/353 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 MTAGAIAGVLEHVVMYPLDSVKTRMQSLSPP---------------------------------- 48
            |.|.....||..:.:.|||.||.|:|:...|                                  
Zfish    19 MLASGTGAVLTSLFVTPLDVVKIRLQAQQTPLFQAIAAESRPWFRVTRPSKWKCFLYCNGLMDHV 83

  Fly    49 --TKNMNIVSTLRTMIT--------------REGLLRPIRGASAVVLGAGPAHSLYFAAYEMTKE 97
              .:||:..|.|....|              .|||.....|....::.|.||..:||..|:..::
Zfish    84 YVCQNMSSCSNLYKTSTHFSGTLDAFVKITHNEGLRSLWSGLPPTLVMAVPATVIYFTCYDQLRD 148

  Fly    98 LTAKFTSVRNLNY------VISGAVATLIHDAISSPTDVIKQRMQMYNSPYTSVVSCVRDIYKRE 156
            ...     .::.|      :|:|.:|.|...::.||.::::.:||.....|:.::.|:|....::
Zfish   149 FLC-----YSMGYHGDHIPLIAGGLARLGAVSVISPLELVRTKMQSRRLQYSELMVCIRSSVAQD 208

  Fly   157 GFKAFYRAYGTQLVMNLPYQTIHFTTYEFFQNKMNLERKYNPP-----VHMAAGAAAGACAAAVT 216
            |:.:.:|.:|..::.::|:..:::..||..  |..|...|..|     :...|||.:||.||.:|
Zfish   209 GWLSLWRGWGPTVLRDVPFSALYWFNYELV--KAQLCEHYRTPQASFTISFTAGAVSGAIAAVLT 271

  Fly   217 TPLDVIKTLLNTQETGLTRGMIEA---------------SRKIYHMAGPLGFFRGTTARVLYSMP 266
            .|.||:||....|     .|.:||               .|.|:...|..|.|.|...||:...|
Zfish   272 LPFDVVKTRRQIQ-----LGEMEALGAVSMKKPSSTWNMMRNIWIDMGYKGLFAGFLPRVIKVAP 331

  Fly   267 ATAICWSTYEFFKFYL---------CGL 285
            |.|:..|||||.|.:.         |||
Zfish   332 ACAVMISTYEFGKTFFQERNLHQARCGL 359

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mfrnNP_651600.1 PTZ00168 17..280 CDD:185494 82/337 (24%)
slc25a39NP_956780.1 Mito_carr 13..150 CDD:395101 27/130 (21%)
Solcar 1 13..149 27/129 (21%)
Solcar 2 157..241 18/85 (21%)
Mito_carr 163..246 CDD:395101 19/84 (23%)
Mito_carr 250..351 CDD:395101 34/105 (32%)
Solcar 3 251..346 34/99 (34%)

Return to query results.
Submit another query.