DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mfrn and Slc25a39

DIOPT Version :10

Sequence 1:NP_651600.1 Gene:mfrn / 43353 FlyBaseID:FBgn0039561 Length:379 Species:Drosophila melanogaster
Sequence 2:NP_001019963.1 Gene:Slc25a39 / 360636 RGDID:1306193 Length:359 Species:Rattus norvegicus


Alignment Length:347 Identity:79/347 - (22%)
Similarity:151/347 - (43%) Gaps:81/347 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 MTAGAIAGVLEHVVMYPLDSVKTRMQS--------LSPPTKNMNI-----VSTLRT----MITRE 65
            |.|.....|:..:.|.|||.||.|:||        |:.|::..::     .|||::    ::...
  Rat    15 MVASGAGAVVTSLFMTPLDVVKVRLQSQRPTVASELTTPSRFWSLSYTKSPSTLQSPGKCLLYCN 79

  Fly    66 GLLRPI---------------------------------------RGASAVVLGAGPAHSLYFAA 91
            |:|.|:                                       .|..|.::...||.::||.|
  Rat    80 GVLEPLYLCPNGTRCATWFQDPTRFTGTLDAFVKIVRHEGTRTLWSGLPATLVMTVPATAIYFTA 144

  Fly    92 YEMTKELTAKFTSVRNLNY--VISGAVATLIHDAISSPTDVIKQRMQMYNSPYTSVVSCVRDIYK 154
            |:..|......:...:| |  :::||:|.:....:.||.::::.::|..:..|..:.:||:....
  Rat   145 YDQLKAFLCGQSLTSDL-YAPMVAGALARMGTVTVVSPLELVRTKLQAQHVSYRELAACVQAAVA 208

  Fly   155 REGFKAFYRAYGTQLVMNLPYQTIHFTTYEFFQNKMNLERKYNPP---VHMAAGAAAGACAAAVT 216
            :.|:::.:..:|...:.::|:..:::..||..::::|..|:....   :...||..:|..||.:|
  Rat   209 QGGWRSLWLGWGPTALRDVPFSALYWFNYELVKSQLNGPRQKEQTSVGISFVAGGISGMVAATLT 273

  Fly   217 TPLDVIKTLLNTQETGLTRGMIEAS--------------RKIYHMAGPLGFFRGTTARVLYSMPA 267
            .|.||:||     :..::.|.:||.              |:|...:|..|.|.|...|::.:.|:
  Rat   274 LPFDVVKT-----QRQMSLGAVEAMRVKPPRVDSTWLLLRRIQAESGTRGLFAGFLPRIIKAAPS 333

  Fly   268 TAICWSTYEFFKFYLCGLDADQ 289
            .||..|||||.|.:...|:.:|
  Rat   334 CAIMISTYEFGKSFFHRLNQEQ 355

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mfrnNP_651600.1 PTZ00168 17..280 CDD:185494 76/336 (23%)
Slc25a39NP_001019963.1 Mito_carr 9..152 CDD:395101 29/136 (21%)
Solcar 1 9..151 29/135 (21%)
Solcar 2 159..243 16/84 (19%)
Mito_carr 161..246 CDD:395101 16/85 (19%)
Solcar 3 253..347 30/98 (31%)
Mito_carr 254..350 CDD:395101 30/100 (30%)

Return to query results.
Submit another query.