DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mfrn and ucp3

DIOPT Version :10

Sequence 1:NP_651600.1 Gene:mfrn / 43353 FlyBaseID:FBgn0039561 Length:379 Species:Drosophila melanogaster
Sequence 2:XP_002942565.1 Gene:ucp3 / 100495495 XenbaseID:XB-GENE-6464668 Length:309 Species:Xenopus tropicalis


Alignment Length:304 Identity:70/304 - (23%)
Similarity:117/304 - (38%) Gaps:50/304 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 LPTTSVGVNMTAGAIAGVLEHVVMYPLDSVKTRMQSLSPPT--------KNMNIVSTLRTMITRE 65
            :|.|.: |.......|..:..:..:|||:.|.|:|.....|        :...:..|::||:..|
 Frog     9 VPPTPL-VKFVGAGTAACIADLFTFPLDTAKVRLQIQGEGTSVKDTKVLRYKGVFGTIKTMVKTE 72

  Fly    66 GLLRPIRGASAVVLGAGPAHSLYFAA-----YEMTKELTAKFT-----SVRNLNYVISGAVATLI 120
            |......|     |.||....:.||:     |:..|:...:.:     :.|.|....:||:|.  
 Frog    73 GATSLYNG-----LVAGLQRQMSFASIRIGLYDSVKQFYCRQSESSGVACRLLAGCTTGAMAV-- 130

  Fly   121 HDAISSPTDVIKQRMQMY------NSPYTSVVSCVRDIYKREGFKAFYRAYGTQLVMNLPYQTIH 179
              .::.||||:|.|.|.:      ...|...|...:.|.|.||.:..::.....:..|.......
 Frog   131 --TLAQPTDVVKVRFQAHIKVMDGERRYNGTVDAYKTIAKEEGLRGLWKGTIANITRNAIVNCAE 193

  Fly   180 FTTYEFFQNKMNLERKY--NPPVHMAAGAAAGACAAAVTTPLDVIKTLLNTQETGLTRGMIEASR 242
            ..||:..:..:..:|..  |.|.|..|...||.||..|.:|:||:||.......|..:..:..:.
 Frog   194 LVTYDLIKETILNQRLMTDNLPCHFVAAFGAGFCATVVASPVDVVKTRYMNSPAGQYKNALNCAF 258

  Fly   243 KIYHMAGPLGFFRGTTARVLYSMPA-------TAICWSTYEFFK 279
            .:....|.:.|::|       .|||       ..:.:.:||..|
 Frog   259 IMLVKEGSVAFYKG-------FMPAFLRLGSWNIVMFVSYEQLK 295

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mfrnNP_651600.1 PTZ00168 17..280 CDD:185494 67/296 (23%)
ucp3XP_002942565.1 PTZ00169 14..299 CDD:240302 68/299 (23%)
Mito_carr 111..206 CDD:395101 21/98 (21%)

Return to query results.
Submit another query.