DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment NSD and SET1

DIOPT Version :9

Sequence 1:NP_733239.1 Gene:NSD / 43351 FlyBaseID:FBgn0039559 Length:1427 Species:Drosophila melanogaster
Sequence 2:NP_011987.1 Gene:SET1 / 856519 SGDID:S000001161 Length:1080 Species:Saccharomyces cerevisiae


Alignment Length:1120 Identity:216/1120 - (19%)
Similarity:367/1120 - (32%) Gaps:327/1120 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   415 PDPLGQIVGNMPSHPQRSSLDNANVPIQ----VHVRFFADNGRRNWIKPENLLTFAG---LKAFD 472
            |.....::...|....|.:.||......    :...||..:...:|...:...:..|   :|...
Yeast   123 PTESALLLQQRPPSVLRYNTDNLKSKFHYFDPIKGEFFNKDKMLSWKATDKEFSETGYYVVKELQ 187

  Fly   473 DMREELRIKHGPKSAKYRQMVPKRT-------KVVIWRQAIEEAQAMTQIPYSDR--------LE 522
            |.:.:.:|||  :..:.:...|:..       ||...|:.......:.:|.| ||        .|
Yeast   188 DGQFKFKIKH--RHPEIKASDPRNENGIMTSGKVATHRKCRNSLILLPRISY-DRYSLGPPPSCE 249

  Fly   523 KFYQTYENVVTLNRQ----KRKRTKY----MMQDTSDVGSSL--------YDSTD-NLHNKQGTQ 570
            ......::..|.|.|    |....||    ..:..:|..|:|        |.|:| .:::.....
Yeast   250 IVVYPAQDSTTTNIQDISIKNYFKKYGEISHFEAFNDPNSALPLHVYLIKYASSDGKINDAAKAA 314

  Fly   571 LLAVKRERSESPFSPAFS---------------------PVK-----SKNEKRAKRRKLSNGTEA 609
            ..||::..|...|...|.                     .||     .:|.|:||.::..|....
Yeast   315 FSAVRKHESSGCFIMGFKFEVILNKHSILNNIISKFVEINVKKLQKLQENLKKAKEKEAENEKAK 379

  Fly   610 D-TGSNSMAVTPSQTETTVDSSAYENPEFRQLLSAVMEYVMMNRSDEKVEKVLLSVVSNIWSLKQ 673
            : .|.:.......:.:|...||..|......||..|....:::.|...|.|....|....:.|:.
Yeast   380 ELQGKDITLPKEPKVDTLSHSSGSEKRIPYDLLGVVNNRPVLHVSKIFVAKHRFCVEDFKYKLRG 444

  Fly   674 IQLRELERDLASGEIEEPLGSSVVGRG-SGVGTIKRLSNRLMTMMVRRSMTPVVTPSTTPAPSEP 737
            .:..:.        |:.|.|..::... :...|.....:..:|:|.|....|::.......|...
Yeast   445 YRCAKF--------IDHPTGIYIIFNDIAHAQTCSNAESGNLTIMSRSRRIPILIKFHLILPRFQ 501

  Fly   738 DR-RLSEPPKTKKPVNRPIE-EVIEDILQLDSKYLFRGLSREPICKYCYQAGSDLVRCSRTCSSW 800
            :| |.::...:....|.||: |..|:.::..:|.:.:.|.:.                       
Yeast   502 NRTRFNKSSSSSNSTNVPIKYESKEEFIEATAKQILKDLEKT----------------------- 543

  Fly   801 LHADCLERKVTGAPMPKIGSRKALVIPPTSKSPSPDEDHVTADAKEVVAVGTSLVCHECNVGEPE 865
            ||.|..:|                :|.||           ..||.:.......|...|....|..
Yeast   544 LHVDIKKR----------------LIGPT-----------VFDALDHANFPELLAKRELKEKEKR 581

  Fly   866 GCVICHQVESP-AVPSTPRKEDSSSHTPIEDKLLTCSQPMCGKRFHTSCCKYWPQASSSKHSARC 929
                 .|:.|. |.....|||::                   ||.......|...|.|:|.:.: 
Yeast   582 -----QQIASKIAEDELKRKEEA-------------------KRDFDLFGLYGGYAKSNKRNLK- 621

  Fly   930 PRH----VCHTCVSDDPSGKFQQLGSSKLAKCVRCPATYHQLSKCIPA-GTQMLNTTNI--ICPR 987
             ||    :.||           .|...||:..::..|  |.|::...: .|..||...|  :...
Yeast   622 -RHNSLALDHT-----------SLKRKKLSNGIKPMA--HLLNEETDSKETTPLNDEGITRVSKE 672

  Fly   988 H-----NIA----------------KADAHVNVLWCYICVKGGELVCCETCPIAVHAHCRN--IP 1029
            |     |:.                |:::.                  .|.|.:.|.|...  :|
Yeast   673 HDEEDENMTSSSSEEEEEEAPDKKFKSESE------------------PTTPESDHLHGIKPLVP 719

  Fly  1030 IKTNESYICEECESGRLPLYGEIVWAKFNNFRWWPAIILPPTE--------VPSNILKKA-HGEN 1085
            .:...|.:. :..|...|...||           |..:.||.|        :.|..|:.| ..|.
Yeast   720 DQNGSSDVL-DASSMYKPTATEI-----------PEPVYPPEEYDLKYSQTLSSMDLQNAIKDEE 772

  Fly  1086 DFVV--RFFGTHDHG-------------WISRRRV---------YLYIEGDTGD-----GHKTKS 1121
            |.::  :...|:...             |.|||:|         .:.:.|...|     |...|:
Yeast   773 DMLILKQLLSTYTPTVTPETSAALEYKIWQSRRKVLEEEKASDWQIELNGTLFDSELQPGSSFKA 837

  Fly  1122 QLFR--------NY------------TTGV-EEASRFLPIIKARRQEQDMERQSGNKLHPPPYVK 1165
            :.||        ||            |..: .|.:.:.|.:..|.:..:.|....    .|..|.
Yeast   838 EGFRKIADKLKINYLPHRRRVHQPLNTVNIHNERNEYTPELCQREESSNKEPSDS----VPQEVS 898

  Fly  1166 IKTNKAVPPLRFSQNLEDLSTCNCLPVDEHPCGPEAGCLNRMLFNECNPEYCKAGSLCENRMFEQ 1230
            ...:......||.|::|         ..:...|.|:..|:   .|:.|                :
Yeast   899 SSRDNRASNRRFQQDIE---------AQKAAIGTESELLS---LNQLN----------------K 935

  Fly  1231 RKSPRLEVVYMNE--RGFGLVNREPIAVGDFVIEYVGEVINHAEFQRRMEQKQRDRDENYYFLGV 1293
            ||.|   |::...  ..:||...:.||..:.:||||||.|.....:.|.::..::...:.|...|
Yeast   936 RKKP---VMFARSAIHNWGLYALDSIAAKEMIIEYVGERIRQPVAEMREKRYLKNGIGSSYLFRV 997

  Fly  1294 EKDFIIDAGPKGNLARFMNHSCEPNCETQKWTVNCIHRVGIFAIKDIPVNSELTFNYLWDDLMNN 1358
            :::.:|||..||.:|||:||.|:|||..:...|....|:.|:|::||..:.|||::|.::...::
Yeast   998 DENTVIDATKKGGIARFINHCCDPNCTAKIIKVGGRRRIVIYALRDIAASEELTYDYKFEREKDD 1062

  Fly  1359 SKK-ACFCGAKRCSG 1372
            .:: .|.|||..|.|
Yeast  1063 EERLPCLCGAPNCKG 1077

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NSDNP_733239.1 MSH6_like 391..508 CDD:99898 18/106 (17%)
PHD2_NSD 867..932 CDD:277040 12/65 (18%)
PHD3_NSD 933..988 CDD:277041 12/57 (21%)
PHD4_NSD 1001..1041 CDD:277042 6/41 (15%)
WHSC1_related 1047..1141 CDD:99899 29/152 (19%)
AWS 1183..1233 CDD:197795 6/49 (12%)
SET 1234..1354 CDD:214614 40/121 (33%)
SET1NP_011987.1 RRM_scSet1p_like 246..360 CDD:409743 20/113 (18%)
SET_assoc 422..486 CDD:403081 12/71 (17%)
SET 612..1080 CDD:225491 117/546 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4489
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.940

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