DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment NSD and SDG25

DIOPT Version :10

Sequence 1:NP_733239.1 Gene:NSD / 43351 FlyBaseID:FBgn0039559 Length:1427 Species:Drosophila melanogaster
Sequence 2:NP_001318731.1 Gene:SDG25 / 834246 AraportID:AT5G42400 Length:1388 Species:Arabidopsis thaliana


Alignment Length:1318 Identity:241/1318 - (18%)
Similarity:415/1318 - (31%) Gaps:502/1318 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly   130 SPTPLSDSDDTIRTTRRRVNQAAALNNSSAGETLAHDNASPRTPGGGGGGGGDDS---------- 184
            |.|..||..::..:...||       :||:.:|...|.....|.|....|...|:          
plant   499 SHTKYSDKPESFESFTCRV-------DSSSSKTAYSDEFDLATNGARVRGLSSDTYGTESVIASI 556

  Fly   185 ----ANQL-LS-KTYMSPIEKLLIKNGASSPNSTGFEA-----------GS--EDLGIRPIVRKH 230
                .|:| || ||:::....:|||:||::..|:..:.           ||  |...:....:| 
plant   557 SEHVENELFLSLKTHLTDYTSILIKDGANNTTSSARDGKMHEENPPSLQGSFREQYNLEGSSKK- 620

  Fly   231 VKRKMKRVPKAKVTLELDEKNQQEVDEKSVKTEPIDEEVDRTDEAPTQEAQTTAISIKSETEAEH 295
             |..:..|| ||:....|..:.|.:.::...:|.|..|                           
plant   621 -KNGLNVVP-AKLRFSNDFSDSQRLLQEGESSEQITSE--------------------------- 656

  Fly   296 KAAVDVHIKQEDTIRLDIVNNPVESTSIVITEEPKDLEKSTEELAFALPLASSTEVDLKSP---- 356
                            ||:.| :.||::..::.|  :....:.||...|.....|.::..|    
plant   657 ----------------DIIAN-IFSTALETSDIP--VNDELDALAIHEPPPPGCESNINMPCLRY 702

  Fly   357 ---PDLSSTALATSIKSPSSVSIDSAK-GLSIVTDPGWPTYQVGDLFWGKVFSYCFWPCMVCPDP 417
               |..|..:: ..||:..|:::...| ...::.|            |..:|..|:         
plant   703 KYQPVRSKESI-PEIKAYVSMALCRQKLHNDVMRD------------WKSLFLKCY--------- 745

  Fly   418 LGQIVGNMPSHPQRSSLDNANVPIQVHVRFFADNGRRNWIKPENLLTFAGLKAFDDMREELRIKH 482
            |.:.:.::....|.|..:...:.            :|..:.....|..:.:.  :...|:||   
plant   746 LNEFLASLKGSHQVSRKETLALK------------KRKTVTRNKKLVQSNIS--NQTAEKLR--- 793

  Fly   483 GPKSAKYRQMVPKRTKVVIWR-QAIEEAQAMTQIPYSDRLEKFYQTYENVVTLNRQKRKRTKYMM 546
                   :..|....||::.| :.:.::.:|.::...|           ..:::...||.::..|
plant   794 -------KPCVGASEKVLVKRSKKLSDSHSMKEVLKVD-----------TPSIDLSVRKPSQQKM 840

  Fly   547 QDTSDVGSSLYDSTDNLH-NKQG----TQLLAVKRE--RSESPFSPAFSPVKSKNEKRAKRRKLS 604
            ::|......:......|| .|.|    ::::..|.:  ..|..|..|....:.:...|.|.::|.
plant   841 RNTDRRDHCIIKDATKLHKEKVGKDAFSKVICDKSQDLEMEDEFDDALLITRLRRISRNKTKELR 905

  Fly   605 NGTEADTGSNSMAVTPSQTETTVDSSAYENPEFRQLLSAVMEYVMMNRSDEKVEKVLLSVVSNIW 669
            ....|......::||..::|.|||...:|..             :.|:..:||:|...|      
plant   906 ECRNAAKSCEEISVTAEESEETVDCKDHEES-------------LSNKPSQKVKKAHTS------ 951

  Fly   670 SLKQIQLRELERD----LASGEIE---EPLGSSVVGRGSGVGTIKRLSNRLMTMMVRRSMTPVVT 727
            .||:..|.: .||    ..:|.::   |..|........|:....::|::.::...::.......
plant   952 KLKRKNLSD-ARDEGTKSCNGAVKSFTEISGKEGDTESLGLAISDKVSHQNLSKRRKKDAAKNGQ 1015

  Fly   728 PSTTPAPSEPDRRLSEPPKTKKPVNRPIEEVIEDILQLDSKYLFRGLSREPICKYCYQAGSDLVR 792
            ..:.|..:.|  ||:|..|.       :|:....|.|...|     .|:..|.|..:|       
plant  1016 DMSNPTGNPP--RLAEGKKF-------VEKSACSISQKGRK-----SSQSSILKRKHQ------- 1059

  Fly   793 CSRTCSSWLHADCLERKVTGAPMPKIGSRKALVIPPTSKSPSPDEDHVTADAKEVVAVGTSLVCH 857
                         |:.|::..|     ||:.|     |.|.:..||.|.                
plant  1060 -------------LDEKISNVP-----SRRRL-----SLSSTDSEDAVI---------------- 1085

  Fly   858 ECNVGEPEGCVICHQVESPAVPSTPRKEDSSSHTPIEDKLLTCSQPMCGKRFHTSCCKYWPQASS 922
                                      |||.....  |:||                         
plant  1086 --------------------------KEDYDVRN--EEKL------------------------- 1097

  Fly   923 SKHSARCPRHVCHTCVSDDPSGKFQQLGSSKLAKCVRCPATYHQLSKCIPAGTQMLNTTNIICPR 987
                      .|||      |.|.|::|.:||.:                               
plant  1098 ----------PCHT------SDKLQKVGPNKLIR------------------------------- 1115

  Fly   988 HNIAKADAHVNVLWCYICVKGGELVCCETCPIAVHAHCRNIPIKTNESYICEECESGRLPLYGEI 1052
                                       ...|:|.|...|: |||.      ...:.||..     
plant  1116 ---------------------------RRKPLAKHTTERS-PIKD------LSVDDGRPK----- 1141

  Fly  1053 VWAKFNNFRWWPAIILPPTEVPSNILKK----AHGENDFVVR--FFGTHDHGWI------SRRR- 1104
                       |..:.|..::.|...||    :..::|...|  ..|.|.|.|.      .|.| 
plant  1142 -----------PIALKPLEKLSSKPSKKKLFLSIPKSDGCARTSINGWHWHAWSLKASAEERARV 1195

  Fly  1105 -----VYLYIEGDTGDGHKTKSQLFRNYTTGVEEASRFLPIIKARRQEQDMERQSGNKLHPPPYV 1164
                 |::...|       :||.|.:|             ::.||                    
plant  1196 RGSSCVHMQHFG-------SKSSLTQN-------------VLSAR-------------------- 1220

  Fly  1165 KIKTNKAVPPLRFSQNLEDLSTCNCLPVDEHPCGPEAGCLNRMLFNECNPEYCKAGSLCENR--- 1226
               ||:|.                               |..:|......:..|...|...:   
plant  1221 ---TNRAK-------------------------------LRNLLAAADGADVLKMSQLKARKKHL 1251

  Fly  1227 MFEQRKSPRLEVVYMNERGFGLVNREPIAVGDFVIEYVGEVINHAEFQRRMEQKQRDRDENYYFL 1291
            .|:|.|.          ..:|||..|||...|||||||||:|..:..:.|..|.::....:.|..
plant  1252 RFQQSKI----------HDWGLVALEPIEAEDFVIEYVGELIRSSISEIRERQYEKMGIGSSYLF 1306

  Fly  1292 GVEKDFIIDAGPKGNLARFMNHSCEPNCETQKWTVNCIHRVGIFAIKDIPVNSELTFNYLWDDLM 1356
            .::..:::||..:|.:|||:||||||||.|:..:|....::.|:|.:.|....|:::||.:.  :
plant  1307 RLDDGYVLDATKRGGIARFINHSCEPNCYTKIISVEGKKKIFIYAKRHIDAGEEISYNYKFP--L 1369

  Fly  1357 NNSKKACFCGAKRCSGEI 1374
            .:.|..|.|||.:|.|.:
plant  1370 EDDKIPCNCGAPKCRGSL 1387

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NSDNP_733239.1 PWWP_NSD_rpt1 395..514 CDD:438972 16/119 (13%)
PHD2_NSD 867..932 CDD:277040 6/64 (9%)
PHD3_NSD 933..988 CDD:277041 9/54 (17%)
PHD4_NSD 1001..1041 CDD:277042 7/39 (18%)
PWWP_NSD_rpt2 1048..1143 CDD:438963 19/112 (17%)
AWS 1183..1233 CDD:197795 6/52 (12%)
SET_NSD 1233..1375 CDD:380950 48/142 (34%)
SDG25NP_001318731.1 SET_SETD1 1237..1384 CDD:380946 51/158 (32%)

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