DRSC/TRiP Functional Genomics Resources

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Protein Alignment NSD and ASHH4

DIOPT Version :9

Sequence 1:NP_733239.1 Gene:NSD / 43351 FlyBaseID:FBgn0039559 Length:1427 Species:Drosophila melanogaster
Sequence 2:NP_001319802.1 Gene:ASHH4 / 825166 AraportID:AT3G59960 Length:329 Species:Arabidopsis thaliana


Alignment Length:282 Identity:87/282 - (30%)
Similarity:146/282 - (51%) Gaps:30/282 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly  1142 KARRQEQDMER-QSGNKLHPPPYVKIKTNKAVPPLRFSQNLED---LSTCNCLPVDEHPCGPEAG 1202
            |.::|..::|: :|.::|:....:.||.|..:.. :..:.::|   ..:|:..|.....||.:..
plant    19 KLKKQIGELEKLESPDRLNNVKPIFIKRNIYLKK-KLKKKVKDHGIFCSCSLDPGSSTLCGSDCN 82

  Fly  1203 CLNRMLFNECNPEYCKAGSLCENRMFEQRKSPRLEVVYMNERGFGLVNREPIAVGDFVIEYVGEV 1267
            |  .:|.:.|:.. ||..|.|.|:.|:||...::::|...:.|:|:|..|.|..|:|:|||||||
plant    83 C--GILLSSCSSS-CKCSSECTNKPFQQRHIKKMKLVQTEKCGYGIVADEDINSGEFIIEYVGEV 144

  Fly  1268 INHAEFQRRMEQKQRDRDENYYFLGVEKDFIIDAGPKGNLARFMNHSCEPNCETQKWTVNCIHRV 1332
            |:....:.|:.:.....:.|:|...:..:.:|||..|||.:|::||||.||.|.|||.::...|:
plant   145 IDDKICEERLWKLNHKVETNFYLCQINWNMVIDATHKGNKSRYINHSCSPNTEMQKWIIDGETRI 209

  Fly  1333 GIFAIKDIPVNSELTFNYLWDDLMNNSKKACFCGAKRCSGEIGGKLKDDAVKAHAKLKQMRRAKA 1397
            ||||.:.|....:||::|.:  :...:.:.|:|||..|..::|.|        ..|.|.....:|
plant   210 GIFATRFINKGEQLTYDYQF--VQFGADQDCYCGAVCCRKKLGAK--------PCKTKNTTLEEA 264

  Fly  1398 SAVRIHVKPK------KTPKVK 1413
                  |||.      ||||.|
plant   265 ------VKPVACKVTWKTPKGK 280

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NSDNP_733239.1 MSH6_like 391..508 CDD:99898
PHD2_NSD 867..932 CDD:277040
PHD3_NSD 933..988 CDD:277041
PHD4_NSD 1001..1041 CDD:277042
WHSC1_related 1047..1141 CDD:99899
AWS 1183..1233 CDD:197795 16/52 (31%)
SET 1234..1354 CDD:214614 45/119 (38%)
ASHH4NP_001319802.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG1081
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR22884
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.910

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