DRSC/TRiP Functional Genomics Resources

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Protein Alignment NSD and SDG20

DIOPT Version :10

Sequence 1:NP_733239.1 Gene:NSD / 43351 FlyBaseID:FBgn0039559 Length:1427 Species:Drosophila melanogaster
Sequence 2:NP_974212.1 Gene:SDG20 / 821169 AraportID:AT3G03750 Length:354 Species:Arabidopsis thaliana


Alignment Length:222 Identity:70/222 - (31%)
Similarity:101/222 - (45%) Gaps:29/222 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly  1176 RFSQNLEDLSTCNCLPVDEHPCGPEAGCLNRMLFNECNPEYCKAGSLCENRMFEQRKSPRLEVVY 1240
            ||..:|.|.|.|.|...:|..|...|......:.|||. ..|..||.|.||:.::..|..|::|.
plant   134 RFGVSLVDESGCECERCEEGYCKCLAFAGMEEIANECG-SGCGCGSDCSNRVTQKGVSVSLKIVR 197

  Fly  1241 MNERGFGLVNREPIAVGDFVIEYVGEVINHAEFQRRME--QKQRDRDENYYFLGVEKDFI----- 1298
            ..::|:.|...:.|..|.|:.||.||::...|.:||..  .|.|........|.|.::.:     
plant   198 DEKKGWCLYADQLIKQGQFICEYAGELLTTDEARRRQNIYDKLRSTQSFASALLVVREHLPSGQA 262

  Fly  1299 -----IDAGPKGNLARFMNHSCE-PNCET--QKWTVNCIHRVGIFAIKDIPVNSELTFNY----- 1350
                 |||...||:|||:||||: .|..|  .:.:...:.|:..||.|||....||:|:|     
plant   263 CLRINIDATRIGNVARFINHSCDGGNLSTVLLRSSGALLPRLCFFAAKDIIAEEELSFSYGDVSV 327

  Fly  1351 ---LWDDLMNNSKKACFCGAKRCSGEI 1374
               ..||.:|     |.||:..|.|.:
plant   328 AGENRDDKLN-----CSCGSSCCLGTL 349

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NSDNP_733239.1 PWWP_NSD_rpt1 395..514 CDD:438972
PHD2_NSD 867..932 CDD:277040
PHD3_NSD 933..988 CDD:277041
PHD4_NSD 1001..1041 CDD:277042
PWWP_NSD_rpt2 1048..1143 CDD:438963
AWS 1183..1233 CDD:197795 16/49 (33%)
SET_NSD 1233..1375 CDD:380950 51/165 (31%)
SDG20NP_974212.1 Pre-SET 70..183 CDD:461530 17/49 (35%)
SET 141..323 CDD:394802 58/182 (32%)
Blue background indicates that the domain is not in the aligned region.

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