DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment NSD and ATX1

DIOPT Version :10

Sequence 1:NP_733239.1 Gene:NSD / 43351 FlyBaseID:FBgn0039559 Length:1427 Species:Drosophila melanogaster
Sequence 2:NP_850170.1 Gene:ATX1 / 817721 AraportID:AT2G31650 Length:1062 Species:Arabidopsis thaliana


Alignment Length:1370 Identity:240/1370 - (17%)
Similarity:419/1370 - (30%) Gaps:531/1370 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly   185 ANQLLSKTY----MSPIEKLLIK-NGASSPNSTGFEAGSEDLGIR----PIVRKHVKRKMKRVPK 240
            ::.|:||..    :..||:..|: :|.|:.:..   ..|:|..:|    .|||.:.:|:.:  |.
plant    46 SHSLMSKKVKAQKLPMIEQFEIEGSGVSASDDC---CRSDDYKLRIQRPEIVRVYYRRRKR--PL 105

  Fly   241 AKVTLELDEKNQQEVDEKSVKTEPID-EEVDRTDEAPTQEAQTTAISIKSETEA-------EHKA 297
            .:..|:      |.|   :||||.:: :|:|..:|...::.....: :||..|:       |:.|
plant   106 RECLLD------QAV---AVKTESVELDEIDCFEEKKRRKIGNCEL-VKSGMESIGLRRCKENNA 160

  Fly   298 -----------AVDVHIKQEDT-----------IRLDIVNNPVESTSIV------------ITEE 328
                       ......|.:|.           :||..  :.|:.||.:            :..|
plant   161 FSGNKQNGSSRRKGSSSKNQDKATLASRSAKKWVRLSY--DGVDPTSFIGLQCKVFWPLDALWYE 223

  Fly   329 PKDLEKSTEELAFALPLASSTEVDL------------KSPPDLSSTALATSIKSPSSVSIDSAKG 381
            ...:..|.|...:.:......:.|:            :...:|......||..:......|....
plant   224 GSIVGYSAERKRYTVKYRDGCDEDIVFDREMIKFLVSREEMELLHLKFCTSNVTVDGRDYDEMVV 288

  Fly   382 LSIVTDPGWPTYQVGDLFWGKVFSYCFWPCMVCPDPLGQIVGNMPSHPQRSSLDN-ANVPIQVHV 445
            |:...|. ...::.||:.|.|:..:..||.::..:   .|:|      :|..|:| .:....:.|
plant   289 LAATLDE-CQDFEPGDIVWAKLAGHAMWPAVIVDE---SIIG------ERKGLNNKVSGGGSLLV 343

  Fly   446 RFFA--DNGRRNWIKPENLLTF-AGLKAFDDMR-EELRIKHGPKSAKY---RQMVPKRTKVV--- 500
            :||.  |..|   ||.:..::| .||.:...:: ::.|.:.|.:.||.   ...:|:|...:   
plant   344 QFFGTHDFAR---IKVKQAISFIKGLLSPSHLKCKQPRFEEGMQEAKMYLKAHRLPERMSQLQKG 405

  Fly   501 --------------------------IWRQAIEEAQAMTQIPYSDRLEKFYQTYENVVTLNRQKR 539
                                      :|.:..|...             |.....:::.:|..|.
plant   406 ADSVDSDMANSTEEGNSGGDLLNDGEVWLRPTEHVD-------------FRHIIGDLLIINLGKV 457

  Fly   540 KRTKYMMQDTSDVGSSLYDS-------TDNLHNKQGTQLLAVKRERSESPFSPAFSPVKSKNEKR 597
            .......:|.:.:....|.:       ||  |:......:.|.|: :|:...|.|.         
plant   458 VTDSQFFKDENHIWPEGYTAMRKFTSLTD--HSASALYKMEVLRD-AETKTHPLFI--------- 510

  Fly   598 AKRRKLSNGTEADTGSNSMAVTPSQTETTVDSSAYENPEFRQLLSAVMEYVMMNRSDEKVEKVLL 662
                     ..||:|......|||                          ...|:...:::||..
plant   511 ---------VTADSGEQFKGPTPS--------------------------ACWNKIYNRIKKVQN 540

  Fly   663 SVVSNIWSLKQIQLRELERDLASGEIEEPLGSSVVGRGSGVGTIKRLSNRLMTMMVRRSMTPVVT 727
            |...||                       ||..:.|.|              |.|...|...|:.
plant   541 SDSPNI-----------------------LGEELNGSG--------------TDMFGLSNPEVIK 568

  Fly   728 PSTTPAPSEPDRRLS----------EPPKTKKPVNRPIEEVIEDILQLDSKYLFRGLSREPICKY 782
            .....:.|.|...:|          ..|...:||            ::|.|.|.:       |..
plant   569 LVQDLSKSRPSSHVSMCKNSLGRHQNQPTGYRPV------------RVDWKDLDK-------CNV 614

  Fly   783 CYQ----AGSDLVRCSRTCSSWLHADCLERKVTGAPMPKIGSRKALVIPPTSKSPSPDEDHVTAD 843
            |:.    ..:..::|.: |...:||.|...                 :.|..             
plant   615 CHMDEEYENNLFLQCDK-CRMMVHAKCYGE-----------------LEPCD------------- 648

  Fly   844 AKEVVAVGTSLVCHECNVGEPE---GCVICHQVESPAVPSTPRKEDSSSHTPIEDKLLTCSQPMC 905
                   |...:|:.|..|.|:   .|.:|..|.....|:|.                       
plant   649 -------GALWLCNLCRPGAPDMPPRCCLCPVVGGAMKPTTD----------------------- 683

  Fly   906 GKRFHTSCCKYWPQASSSKHSARCPRHVCHTCVSDDPSGKFQQL-GSSKLAKCVRCPATYHQLSK 969
            |:..|.:|..:.|:                ||:||  ..|.:.: |.:|::|             
plant   684 GRWAHLACAIWIPE----------------TCLSD--VKKMEPIDGVNKVSK------------- 717

  Fly   970 CIPAGTQMLNTTNIICPRHNIAKADAHVNVLWCYIC-VKGGELVCC--ETCPIAVHAHCRNIPIK 1031
                            .|..          |.|.|| |..|..:.|  .:|.:|.|      |:.
plant   718 ----------------DRWK----------LMCTICGVSYGACIQCSNNSCRVAYH------PLC 750

  Fly  1032 TNESYICEECESGRLPLYGEIVWAKFNNFRWWPAIILPPTEVPSNILKKAHGENDFVVRFFGTHD 1096
            ...:.:|.|.                                          |||          
plant   751 ARAAGLCVEL------------------------------------------END---------- 763

  Fly  1097 HGWISRRRVYLYIEGDTGDGHKTKSQLFRNYTTGVEEASRFLPIIKARRQEQDMERQSGNKLHPP 1161
                      :.:||:..|                 :..|.|...|..||.......|.:::...
plant   764 ----------MSVEGEEAD-----------------QCIRMLSFCKRHRQTSTACLGSEDRIKSA 801

  Fly  1162 PYVKIKTNKAVPPLRFSQNLEDLSTCNCLPVDEHPC-------GPE--AGCLNRMLFNECNP--- 1214
            .:   ||::.:||...|         .|...:.:.|       .||  |...::.||.|..|   
plant   802 TH---KTSEYLPPPNPS---------GCARTEPYNCFGRRGRKEPEALAAASSKRLFVENQPYVI 854

  Fly  1215 ------EYCKAGSLCENRMFEQRKSPRL-----EVVYMNE-------------RGFGLVNREPIA 1255
                  |:....|:..:::.:......:     :..||.|             .|||:..:.|..
plant   855 GGYSRLEFSTYKSIHGSKVSQMNTPSNILSMAEKYRYMRETYRKRLAFGKSGIHGFGIFAKLPHR 919

  Fly  1256 VGDFVIEYVGEVINHAEFQRRMEQKQRDR-DENYYFLGVEKDFIIDAGPKGNLARFMNHSCEPNC 1319
            .||.:|||.||::..:...:|.:...... ....|...::.:.:|||...|::|..:||||.|||
plant   920 AGDMMIEYTGELVRPSIADKREQLIYNSMVGAGTYMFRIDDERVIDATRTGSIAHLINHSCVPNC 984

  Fly  1320 ETQKWTVNCIHRVGIFAIKDIPVNSELTFNYLWDDLMNNSKKACFCGAKRCSGEIGGKLKDDAVK 1384
            .::..|||....:.|||.:.||...|||::|.:..:  ..:.:|.||...|.|.:.   ..:|.:
plant   985 YSRVITVNGDEHIIIFAKRHIPKWEELTYDYRFFSI--GERLSCSCGFPGCRGVVN---DTEAEE 1044

  Fly  1385 AHAKL 1389
            .|||:
plant  1045 QHAKI 1049

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NSDNP_733239.1 PWWP_NSD_rpt1 395..514 CDD:438972 29/155 (19%)
PHD2_NSD 867..932 CDD:277040 9/64 (14%)
PHD3_NSD 933..988 CDD:277041 8/55 (15%)
PHD4_NSD 1001..1041 CDD:277042 11/42 (26%)
PWWP_NSD_rpt2 1048..1143 CDD:438963 8/94 (9%)
AWS 1183..1233 CDD:197795 11/67 (16%)
SET_NSD 1233..1375 CDD:380950 45/160 (28%)
ATX1NP_850170.1 Tudor_Agenet_AtEML-like 207..257 CDD:410475 4/49 (8%)
PWWP_AtATX1-like 300..396 CDD:438970 25/107 (23%)
FYRN 447..497 CDD:461787 7/51 (14%)
FYRC 508..597 CDD:470645 24/169 (14%)
PHD_ATX1_2_like 611..657 CDD:276969 10/90 (11%)
ePHD_ATX1_2_like 668..784 CDD:277132 40/280 (14%)
SET_SETD1-like 885..1034 CDD:380916 43/150 (29%)

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