DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment NSD and Setd5

DIOPT Version :9

Sequence 1:NP_733239.1 Gene:NSD / 43351 FlyBaseID:FBgn0039559 Length:1427 Species:Drosophila melanogaster
Sequence 2:XP_006506740.1 Gene:Setd5 / 72895 MGIID:1920145 Length:1467 Species:Mus musculus


Alignment Length:1137 Identity:214/1137 - (18%)
Similarity:346/1137 - (30%) Gaps:451/1137 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 EVAAGNDESVATEGDD---VEIPRDTNNSTPVRLLDKPGQNPVQNGAQPAAEESELES-QRQT-- 92
            |:.......|..|..|   .|:|.....|.....:|.|.:.|.:...:.|.::.|..: .|:|  
Mouse   473 ELELEQQNEVPEENPDPQPQEVPEKVTVSNEHEEVDNPEEKPEEEEKEEATDDQENSAHSRRTRE 537

  Fly    93 ------------PVQKQQQQRVSMVNRKRDLINLQSALSPKYIG--------YANANSP------ 131
                        .::|::::|...|.:....|.:.::.|...:|        .:..:||      
Mouse   538 DRKVEAIMHAFESLEKRKKRRDQPVEQSSSDIEITTSSSEIVVGEETKTAAPESEVSSPVSNVAI 602

  Fly   132 --TPLSDSDDTIRTTRRRVNQAAALNNSSAGETLAHDNASPRTPGGGGGGG---------GDDSA 185
              ||.|...:|.|             :|.||: :|.:...|:.|.......         ...||
Mouse   603 PSTPQSTGVNTRR-------------SSHAGD-VAAEKPIPKPPPAKPSRPRPKSRISRYRTSSA 653

  Fly   186 NQLLSK----TYMSPIEKLLIKNGASSPNSTGFEAGSED--------LGIRP----IVRKHVKRK 234
            .:|..:    ...:.:.:..::.|.|:.:.|..|||:.|        .|..|    :...||.|.
Mouse   654 QRLKRQKQAIAQQAELSQAALEEGGSNNSVTPPEAGNTDSSGENRQLTGSDPTVISVTGSHVNRA 718

  Fly   235 MKRVPKAK---VTLELDEKNQQEVDEKSVKTEPIDEEVDRTDEAPT------------------- 277
            ..:.||.|   ||..|::|.:::  |..|:. |:....|.|..|.|                   
Mouse   719 ASKYPKTKKYLVTEWLNDKAEKQ--ECPVEC-PLRITTDPTVLATTLNMLPGLIHSPLICTTPKH 780

  Fly   278 -----------------------------------QEAQTTAISIKSETEAEHKAAVDVHIKQED 307
                                               :|..|...|:..||..:|            
Mouse   781 YIRFGSPFMPERRRRPLLPDGTFSSCKKRWIKQALEEGMTQTSSVPQETRTQH------------ 833

  Fly   308 TIRLDIVNNPVESTSIVITEEPKDL-------------EKSTEELAFAL-------PLASSTEVD 352
                 :..:...|.|..|.::..||             |::..:|...|       |.:.|....
Mouse   834 -----LYQSNETSNSSSICKDNADLLSPLKKWKSRYLMEQNITKLLQPLSPVTPPPPSSGSKSPQ 893

  Fly   353 LKSP------------------PDLSSTALATSIKSPSSVSIDSAKGLSIVTDPGWP---TYQVG 396
            |.:|                  ..::|...|:...:|....:...|.|.: |..|:|   |:...
Mouse   894 LTTPGQTHPGEEECRNGYSLMFSPITSLTTASRSNTPLQFELCHRKDLDL-TKVGFPDSSTHSCA 957

  Fly   397 DLFWGKVFSYCFWPCMV-CPDPLGQIVGNMPSHPQRSSLDNANVPIQVHVRFFADNGRRNWIKPE 460
            |.           |.:: |..|      ::.|||.......|..|            .|:...|:
Mouse   958 DR-----------PSLLNCNHP------DLASHPSVVPTSEAGFP------------SRSGDGPQ 993

  Fly   461 NLL---------------TFAGLKAF---DDM---------REELRIKHG---PK---SAKYR-- 490
            .||               .::.|.|.   |.:         |:.|.:..|   |.   |::|.  
Mouse   994 TLLRNSDQAFRTEFNLMYAYSPLNAMPRADGLYRGSPLVGDRKPLHLDGGYCSPAEGFSSRYEHG 1058

  Fly   491 -------------------------QMVPKRTKVVI--WRQAIEEAQAMTQIPYSDRLEKFYQTY 528
                                     |..|:|.||.:  :|:..:||:                  
Mouse  1059 FMKDLSRGSMSPGGERTCEGVPSAPQNPPQRKKVSLLEYRKRKQEAK------------------ 1105

  Fly   529 ENVVTLNRQKRKRTKYMMQDTSDVGSSLYDSTDNLHNKQGTQLLAVKRERSESPFSP--AFSPVK 591
            ||....|...:.::|   ...:..|||...|....|..||:.        :.:|.||  .|||..
Mouse  1106 ENSGGGNDSSQSKSK---SSGAGQGSSNSVSDTGAHGVQGSS--------AGTPSSPHKKFSPSH 1159

  Fly   592 SKNEKRAKRRKLSNGTEADTGSNSMAVTPSQTETTVDSSA--YENPEFRQLLSAVMEYVMMNRSD 654
            |                  :.|:..||:||.:..|..|..  .||...|.::...:|.:   |..
Mouse  1160 S------------------SASHLEAVSPSDSRGTSSSHCRPQENISSRWMVPTSVERL---REG 1203

  Fly   655 EKVEKVLLSVV--------SNIWSLKQIQLRELERDLASGEIEEPLGSSVVGRGSGVGTIKRLSN 711
            ..:.|||.|.|        |..|   :..:.|.|.|.|.||..||| ||.:.:|:.|.:..|.|.
Mouse  1204 GSIPKVLRSSVRVAQKGEPSPTW---ESNITEKESDPADGEGPEPL-SSALSKGATVYSPSRYSY 1264

  Fly   712 RLM---------TMMVRRSMTP----------------VVTPSTTPAPSEPDRRLSEP--PKTKK 749
            :|:         ..::::|.:|                .:.|...|:....:..||..  |....
Mouse  1265 QLLQCDSPRTESQSLLQQSSSPFRGHPTQSPGYSYRTTALRPGNPPSHGSSESSLSSTSYPSPAH 1329

  Fly   750 PVNRPIEEVIEDILQLDSKYLFRG----LSREPICKYCYQAGSDLVRCSRTCSSWLHADCLERKV 810
            ||:            .||...|.|    .|.:|  ......||:|.|  |:|||           
Mouse  1330 PVS------------TDSLAPFTGTPGYYSSQP--HSGNSTGSNLPR--RSCSS----------- 1367

  Fly   811 TGAPMPKIGSRKALVIPPTSKSPSPDEDHVTADAKEVVAVGTSLVCHECNVGEPEGCVICHQVES 875
                         ....||.:.||   |..|:|:....:.||                       
Mouse  1368 -------------SAASPTPQGPS---DSPTSDSVSQSSTGT----------------------- 1393

  Fly   876 PAVPSTPRKEDSSSHTPIEDKLLTCSQPMCGK 907
              :.||...::|.|..|.:  |.|.|.|..|:
Mouse  1394 --LSSTSFPQNSRSSLPSD--LRTISLPNAGQ 1421

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NSDNP_733239.1 MSH6_like 391..508 CDD:99898 30/182 (16%)
PHD2_NSD 867..932 CDD:277040 10/41 (24%)
PHD3_NSD 933..988 CDD:277041
PHD4_NSD 1001..1041 CDD:277042
WHSC1_related 1047..1141 CDD:99899
AWS 1183..1233 CDD:197795
SET 1234..1354 CDD:214614
Setd5XP_006506740.1 SET_SETD5 292..441 CDD:380958
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4489
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.030

Return to query results.
Submit another query.