DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment NSD and PHF20

DIOPT Version :9

Sequence 1:NP_733239.1 Gene:NSD / 43351 FlyBaseID:FBgn0039559 Length:1427 Species:Drosophila melanogaster
Sequence 2:NP_057520.2 Gene:PHF20 / 51230 HGNCID:16098 Length:1012 Species:Homo sapiens


Alignment Length:738 Identity:144/738 - (19%)
Similarity:240/738 - (32%) Gaps:232/738 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   468 LKAFDDMREELRIKHGPKSAKYRQMV----PKRTKVVIWRQAIEEAQAMTQIPYSDRLEKFYQTY 528
            :|.:|.:.:.::..|....:|.:.:|    ||.|          :.::::..|  |:.|||    
Human   118 VKFYDGVVQTVKHIHVKAFSKDQNIVGNARPKET----------DHKSLSSSP--DKREKF---- 166

  Fly   529 ENVVTLNRQKRKRTKYMMQDTSDVGSSLYDSTDNLHNKQGTQLLAVKRERSESPFSPAFSPVKSK 593
                   :::||.|..:.:|..|..... :......:|:|..:.:.|.:.||...        .|
Human   167 -------KEQRKATVNVKKDKEDKPLKT-EKRPKQPDKEGKLICSEKGKVSEKSL--------PK 215

  Fly   594 NEKRAKRRKLSNGTEADTGSNSMAVTPSQTETTVDSSAYENPEFRQLLSAVMEYVMMNRSDEKVE 658
            |||..|    .|.:|.|...:..|....:.|..:..|..||  .|:          ..|...:..
Human   216 NEKEDK----ENISENDREYSGDAQVDKKPENDIVKSPQEN--LRE----------PKRKRGRPP 264

  Fly   659 KVLLSVV-SNIWSLKQIQLRELERDLASGEIEEPLGSSVVGRGSGVGTIKRLSNRLMTMMVRRSM 722
            .:..:.| ||..:|:.|.| ||.|...|...|.||....:.:.|.....|..|......:.||..
Human   265 SIAPTAVDSNSQTLQPITL-ELRRRKISKGCEVPLKRPRLDKNSSQEKSKNYSENTDKDLSRRRS 328

  Fly   723 TPVVTPSTTPAPSEPDRRLSEPPKTKKPVNRPIEEVIEDILQLDSKYLFRGLSREPICKYCYQAG 787
            :.:.|..|... .:||..:|:...|.     |:::.:....:          |.|...|...:||
Human   329 SRLSTNGTHEI-LDPDLVVSDLVDTD-----PLQDTLSSTKE----------SEEGQLKSALEAG 377

  Fly   788 SDLVRCSRTCSSW--------LHADC-------LERKVTGAPMPKIGSRKALVIPPT-------- 829
            .  |..:.||.|:        |..:|       ::.:.| :|:.::.....:.:..|        
Human   378 Q--VSSALTCHSFGDGSGAAGLELNCPSMGENTMKTEPT-SPLVELQEISTVEVTNTFKKTDDFG 439

  Fly   830 -SKSPSPDEDH----VTADAKEVVAVGTSLVCH-------ECNVGEPEGCVICHQVESPAVPSTP 882
             |.:|:.|.||    ...|..:.......|..|       |.:: |||        |||......
Human   440 SSNAPAVDLDHKFRCKVVDCLKFFRKAKLLHYHMKYFHGMEKSL-EPE--------ESPGKRHVQ 495

  Fly   883 RKEDSSSHTPIED----KLLTCSQPMC-------GKRFHTSCCKYWPQASSSKHSARCPRHVCHT 936
            .:..|:|..|.::    |.::.|.|..       .|:| ....:..|:....|.....|...|  
Human   496 TRGPSASDKPSQETLTRKRVSASSPTTKDKEKNKEKKF-KEFVRVKPKKKKKKKKKTKPECPC-- 557

  Fly   937 CVSDDPSGKFQQLGSSKLAKCVRC----------------PATYHQLSKCIPA------------ 973
              |::.|...|:....|.....||                |.:.|...| :.|            
Human   558 --SEEISDTSQEPSPPKAFAVTRCGSSHKPGVHMSPQLHGPESGHHKGK-VKALEEDNLSESSSE 619

  Fly   974 ---------GTQMLNTTNIICPRHNIAKADAH-VNVLWCYICVKGGE---LVCCETCPIAVHAHC 1025
                     |..:..|||   |...:...|.: ..|:.| ||....|   ::.||.|....|..|
Human   620 SFLWSDDEYGQDVDVTTN---PDEELDGDDRYDFEVVRC-ICEVQEENDFMIQCEECQCWQHGVC 680

  Fly  1026 -----RNIPIKTNESYICEECES--GRLPLYGEIVWAKFNNFRWWPAIILPPTEVPSNILKKAHG 1083
                 .|:|    |.|.|..|:.  |:.|           .|::|                    
Human   681 MGLLEENVP----EKYTCYVCQDPPGQRP-----------GFKYW-------------------- 710

  Fly  1084 ENDFVVRFFGTHDHGWISRRRVY 1106
                       :|..|:||..::
Human   711 -----------YDKEWLSRGHMH 722

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NSDNP_733239.1 MSH6_like 391..508 CDD:99898 8/43 (19%)
PHD2_NSD 867..932 CDD:277040 14/75 (19%)
PHD3_NSD 933..988 CDD:277041 16/91 (18%)
PHD4_NSD 1001..1041 CDD:277042 14/47 (30%)
WHSC1_related 1047..1141 CDD:99899 7/60 (12%)
AWS 1183..1233 CDD:197795
SET 1234..1354 CDD:214614
PHF20NP_057520.2 MBT 3..68 CDD:302657
TUDOR 90..135 CDD:119391 3/16 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 142..336 53/242 (22%)
DUF3776 176..259 CDD:289391 21/107 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 481..611 28/144 (19%)
PHD_PHF20 654..697 CDD:277104 14/47 (30%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 866..912
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4489
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
11.030

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