DRSC/TRiP Functional Genomics Resources

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Protein Alignment NSD and Set8

DIOPT Version :10

Sequence 1:NP_733239.1 Gene:NSD / 43351 FlyBaseID:FBgn0039559 Length:1427 Species:Drosophila melanogaster
Sequence 2:NP_650354.1 Gene:Set8 / 41743 FlyBaseID:FBgn0011474 Length:691 Species:Drosophila melanogaster


Alignment Length:838 Identity:161/838 - (19%)
Similarity:278/838 - (33%) Gaps:248/838 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   593 KNEKRAKRRKLSNGTEADTGSN---SMAVTPSQTETTVDSSAYENPEFR-----------QLLSA 643
            :.::.||....|:...|.:||.   ..|:..:.....::...:.:|:.:           ||..|
  Fly     6 RRQRPAKEAASSSSGGASSGSGIPVDQALPLNVAGNLLEDQYFASPKRKDCRLMKVTQNGQLPEA 70

  Fly   644 VMEYVMMNRSDEKVEKVL---------LSVVSNIW--------SLKQIQLRELERDLASGEI--- 688
            .|   |.:..|.|..:.:         ...:.|.:        |.|.|...| :.:|.:.|:   
  Fly    71 TM---MAHNKDNKAGRTIGVPLATRSQTRTIENFFKANAAAKDSQKTIHTEE-QLNLGNQELKLD 131

  Fly   689 EEPLGSSVVGRGSGVGTIKRLSNRLMTMMVRRSMTPVVTPSTTPAPSEPDRRLSEPPKTKKPVNR 753
            :|.|...:           :|.:.::.:..::      .....|...|.|.:..:     |.::.
  Fly   132 DEELNGQI-----------KLDDEVLKLADKQ------INENLPFADEVDAKAEQ-----KLMDE 174

  Fly   754 PIEEVIEDILQLDSKYLFRGLSREPICKYCYQAGSDLVRCSRTCSSWLHADCLERKVTGAPMPKI 818
            .:::|:|::       ||.|.||.......||...|:::..:......|.    :||| .|:..:
  Fly   175 ELQQVVEEL-------LFDGSSRASSNSPFYQHDMDVMQEIQQTPEIPHI----KKVT-EPLEGL 227

  Fly   819 GSRKALVIPPTSKSPSPDEDHVTADAKEVVAVGTSLVCHECNVGEPEGCVICHQVESPAVPSTPR 883
            ||   |....|.:|...|....|               |..:.   :...:...|.:..:..||.
  Fly   228 GS---LADFQTHRSALRDSHSST---------------HSSST---DNIFLQEPVLTLDIDRTPT 271

  Fly   884 KEDSSSHTPIEDKLLTCSQPMCGKRFHTSCCKYWPQASSSKHSARCPRHVCHTCVSDDPSGKFQQ 948
            |..|..        :..|..:.|..|.:                  |..|.:.|:    :|:|.|
  Fly   272 KASSIK--------INRSFELAGAVFSS------------------PPSVLNACL----NGRFNQ 306

  Fly   949 L----GSSKLAKCVRCPATYHQLSKC-------------IPAG----TQMLNTTNIICPRHNIAK 992
            :    |..:...........|..|.|             .|||    .:......|:||      
  Fly   307 IVSLNGQKEALDLPHFDLDQHDSSSCDSGVACGLTANTESPAGQPRRRKPATPHRILCP------ 365

  Fly   993 ADAHVNVLWCYICVKGGELVCCETCPIAVHAHCRNIPIKTNESYICEECESGRLPLYGEIVWAKF 1057
                 :.:...:.|.||........|::.....|.:|..|   .....|:|.|          :.
  Fly   366 -----SPIKTALKVTGGICKVGSADPLSPRKSPRKLPTTT---AAVAACKSRR----------RL 412

  Fly  1058 NNFR----WWPAIILPPTEVPSNILKKAHGENDFVVRFFGTHDHGWISRRRVYLYIEGDTGDGHK 1118
            |..:    :.|.:..||::      ::...::|.||......|             |||..|..:
  Fly   413 NQPKPQAPYQPQLQKPPSQ------QQQQQQDDIVVVLDDDDD-------------EGDDEDDVR 458

  Fly  1119 TKSQLFRNYTTGVEEASRFLPIIKARRQEQDMER--------QSGNK--LHPPPYVKIKT----- 1168
            .                    :|||..:.::..:        ::|.|  |.|.| ||.||     
  Fly   459 A--------------------LIKAAEERENQNKAPATANSNKAGMKTMLKPAP-VKSKTKSKGP 502

  Fly  1169 NKAVPPLRFSQNLEDLSTCNCLPVDEHPCGPEAGCLNRMLFNECNPEYCKAGSLCENRMFEQRKS 1233
            .|..|||..:....:....:..||....         |........|:.:.   .|..:.|:| .
  Fly   503 TKGQPPLPLAATNGNREMTDFFPVRRSV---------RKTKTAVKEEWMRG---LEQAVLEER-C 554

  Fly  1234 PRLEVVYMNERGFGLVNREPIAVGDFVIEYVGEVINHAEFQRRMEQKQRDRDEN-----YYFLGV 1293
            ..|:|.:...:|.|:|...|....:||:||||::|:..|...|  :|:...|||     |||...
  Fly   555 DGLQVRHFMGKGRGVVADRPFKRNEFVVEYVGDLISIGEAAER--EKRYALDENAGCYMYYFKHK 617

  Fly  1294 EKDFIIDAG-PKGNLARFMNHSCEPNCETQKWTVNCIHRVGIFAIKDIPVNSELTFNY 1350
            .:.:.|||. ..|.|.|.:|||...|..|:...:.....:.:.|..||....|||::|
  Fly   618 SQQYCIDATVDTGKLGRLINHSRAGNLMTKVVLIKQRPHLVLLAKDDIEPGEELTYDY 675

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NSDNP_733239.1 PWWP_NSD_rpt1 395..514 CDD:438972
PHD2_NSD 867..932 CDD:277040 9/64 (14%)
PHD3_NSD 933..988 CDD:277041 15/75 (20%)
PHD4_NSD 1001..1041 CDD:277042 7/39 (18%)
PWWP_NSD_rpt2 1048..1143 CDD:438963 13/98 (13%)
AWS 1183..1233 CDD:197795 7/49 (14%)
SET_NSD 1233..1375 CDD:380950 40/124 (32%)
Set8NP_650354.1 SET_SETD8 539..678 CDD:380926 44/143 (31%)
Blue background indicates that the domain is not in the aligned region.

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