DRSC/TRiP Functional Genomics Resources

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Protein Alignment NSD and CG4565

DIOPT Version :10

Sequence 1:NP_733239.1 Gene:NSD / 43351 FlyBaseID:FBgn0039559 Length:1427 Species:Drosophila melanogaster
Sequence 2:NP_001097743.1 Gene:CG4565 / 41303 FlyBaseID:FBgn0037841 Length:269 Species:Drosophila melanogaster


Alignment Length:216 Identity:61/216 - (28%)
Similarity:95/216 - (43%) Gaps:41/216 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly  1195 HPCGPEAGCLNR------------------MLFNECNP-----EYCK-AGSLCENRMFEQRKSPR 1235
            :||..:..|.|.                  :|.|..||     :.|| ..:.|.||:........
  Fly    48 NPCHCKGACENSEVCAHGGQYEFTEDGSELILRNSANPVIECNDMCKCCRNTCSNRLVYSGPRKH 112

  Fly  1236 LEV----VYMNERGFGLVNREPIAVGDFVIEYVGEVINHAEFQRRMEQKQRDRDENYYFL----- 1291
            ||:    ||.::   ||.....|..|.::.||.||::...|.:.|:...::....||..:     
  Fly   113 LEIFDSPVYGSK---GLRTTAKITKGGYICEYAGELLTVPEARSRLHDNEKLGLMNYILVLNEYT 174

  Fly  1292 --GVEKDFIIDAGPKGNLARFMNHSCEPNCETQKWTVNC-IHRVGIFAIKDIPVNSELTFNYLWD 1353
              ..::..|:|...:||:.|::||||||||......::| |.::||||.:||....||.|:|..:
  Fly   175 SDKKQQVTIVDPSRRGNIGRYLNHSCEPNCHIAAVRIDCPIPKIGIFAARDIAAKEELCFHYGGE 239

  Fly  1354 DLMN--NSKKACFCGAKRCSG 1372
            ....  ...|.|.|||.:|:|
  Fly   240 GQYKKMTGGKTCLCGASKCTG 260

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NSDNP_733239.1 PWWP_NSD_rpt1 395..514 CDD:438972
PHD2_NSD 867..932 CDD:277040
PHD3_NSD 933..988 CDD:277041
PHD4_NSD 1001..1041 CDD:277042
PWWP_NSD_rpt2 1048..1143 CDD:438963
AWS 1183..1233 CDD:197795 13/61 (21%)
SET_NSD 1233..1375 CDD:380950 48/154 (31%)
CG4565NP_001097743.1 SET_SETMAR 16..267 CDD:380942 61/216 (28%)
Blue background indicates that the domain is not in the aligned region.

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