DRSC/TRiP Functional Genomics Resources

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Protein Alignment NSD and Ehmt2

DIOPT Version :10

Sequence 1:NP_733239.1 Gene:NSD / 43351 FlyBaseID:FBgn0039559 Length:1427 Species:Drosophila melanogaster
Sequence 2:XP_006256016.3 Gene:Ehmt2 / 361798 RGDID:1302972 Length:1394 Species:Rattus norvegicus


Alignment Length:1352 Identity:274/1352 - (20%)
Similarity:434/1352 - (32%) Gaps:441/1352 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   297 AAVDVHIKQEDTIRLDIVNNPVESTSIVITEEPKDLEKSTEELAFALPLASSTEVDLKSP----- 356
            |:|.|.:..|.      .:.||.:|.: |.|||::||.....:.    |..:|:....||     
  Rat   246 ASVTVTVGDEG------ADTPVGATPL-IGEEPENLEGDGGRIL----LGHATKSFPSSPSKGGA 299

  Fly   357 -PDLSSTALATSIKSPSSVSIDSAKGLSIVTDPGWPTYQVGDLFWGKVFSYCFWPCMVCPDPLGQ 420
             |..:..::..:.|||.||...:.:.||:....|..|                    ..|:|   
  Rat   300 CPSRAKMSMTGAGKSPPSVQSLAMRLLSMPGAQGAAT--------------------AGPEP--- 341

  Fly   421 IVGNMPSHPQRSSLDNANVPIQVHVRFFADNGRRNWIKPENLLTFAGLKAFDDMR----EELRIK 481
                    |..::......| :||      ..|:...||.|     |.....:.|    :..|:.
  Rat   342 --------PPATTAGQEGQP-KVH------RARKTMSKPSN-----GQPPVPEKRPPEVQHFRMS 386

  Fly   482 HGPKSAKYRQMVPKRTK------------------VVIWR---QAIEEAQAMTQIPYSDRLEKFY 525
            ......|....|.||.|                  |::.:   :.:||.:.:.    .|....:|
  Rat   387 DDMHLGKVTSDVAKRRKLTSGSLSEDLGSAGGSGEVILEKGEPRPLEEWETVV----GDDFSLYY 447

  Fly   526 QTYENVVTLNRQKRKRTKYMMQDTSDVGSSLYDSTD-------------------NLHNKQGT-- 569
            ..|.....::...:...:.:.:..|:......:..:                   |..::.|:  
  Rat   448 DAYSVDERVDSDSKSEVEALAEQLSEEEEEEEEEEEEEEEEEEEEEEEEEDEESGNQSDRSGSSG 512

  Fly   570 QLLAVKRERSESPFSPAFSPVKSKNEKRAKRRKLSNGTEADTGSNSMAV-------------TPS 621
            :..|.|:.|.:||:.......:.:...|||..:..||..:...|..|.|             :|:
  Rat   513 RRKAKKKWRKDSPWVKPSRKRRKREPPRAKEPRGVNGVGSSGPSEYMEVPLGSLELPSEGTLSPN 577

  Fly   622 QTETTVDSSAYENP---EFRQLLSAVMEYVMMNRSDEKVEKVLLSVVS--------NIWSLKQIQ 675
            ....:.|:|:.|..   |...|.|..||...::|..|:.....::..|        |...||:..
  Rat   578 HAGVSNDTSSLETERGFEELPLCSCRMEAPKIDRISERAGHKCMATESVDGELLGCNAAILKRET 642

  Fly   676 LRELERDLASGEIEEPLGSSVVGR----GSG----VGTIK------RLSNRLMTMMVRRSMTPVV 726
            :|...| :|...:.|...:.:|..    |.|    .||..      |:::|.....|.:....|.
  Rat   643 MRPSSR-VALMVLCEAHRARMVKHHCCPGCGYFCTAGTFLECHPDFRVAHRFHKACVSQLNGMVF 706

  Fly   727 TPSTTPAPSE------PDRRLSEPP-KTKKPVNRPIEEVI---EDILQLDSKYLFRGLSREPICK 781
            .|......||      |......|| .|..|...|:....   .|..|..::....|..|.|.|.
  Rat   707 CPHCGEDASEAQEVTIPRGDGGTPPVGTVAPAPPPLAHDAPGRADTSQPSARMRGHGEPRRPPCD 771

  Fly   782 YCYQAGSDLVRCSRTCSSWLHADCLERKVTGAPMPKIGSRKALVIPPTSKSPSPDEDHVTADAKE 846
            ..                   ||.::.......:|..|...|:.:||             ...:|
  Rat   772 PL-------------------ADTIDSSGPSLTLPNGGCLSAVGLPP-------------GPGRE 804

  Fly   847 VVAVGTSLVCHECNVGEPEGCVICHQVES-PAVPSTPRKEDSSSHTPIEDKLLTCSQPMCGKRFH 910
            .:                |..::..:.|| |:.|.:|.:.......| ....|:..|....|...
  Rat   805 AL----------------EKALVIQESESLPSPPPSPGRRKKLRFHP-RQLYLSVKQGELQKVIL 852

  Fly   911 TSCCKYWPQASSSKHSARCPRH---------VCHTCVSDDPSGKFQQLGS--SKLAKCVRCP--- 961
            .......|...|.:.|.|.|.|         :||..:         |.|:  :.:.|..|.|   
  Rat   853 MLLDNLDPNFQSDQQSKRTPLHAAAQKGSVEICHVLL---------QAGANINAVDKQQRTPLME 908

  Fly   962 ---------ATYH-QLSKCIPAGTQMLNTTNIICPRHN------------IAKADAHVN------ 998
                     |.|. ||..|:.:..:..:|    |..|.            ::.....||      
  Rat   909 AVVNNHLEVARYMVQLGGCVYSKEEDGST----CLHHAAKIGNLEMVSLLLSTGQVDVNAQDSGG 969

  Fly   999 ---VLWCYICVKGGELVCCETCPIAVHAHC----------RNIPIKTNESYICEECESGRLPLYG 1050
               ::|.                 |.|.|.          .::.:..||..||            
  Rat   970 WTPIIWA-----------------AEHKHIDVIRMLLTRGADVTLTDNEENIC------------ 1005

  Fly  1051 EIVWAKFNNFRWWPAIILPPTEVPSNILKKAHGENDFVVRFFGTHDHG----WISRRRVY----- 1106
             :.||.|..    .|.|   .||..|.....|..|          .||    .|:.|..|     
  Rat  1006 -LHWASFTG----SAAI---AEVLLNAQCDLHAVN----------YHGDTPLHIAARESYHDCVL 1052

  Fly  1107 LYI-----------EGDTG-DGHKTKS------QLFRNYTTGVEEASRFLPIIKARRQE----QD 1149
            |::           ||||. |....:|      ||.|....||..        :|.|.|    :|
  Rat  1053 LFLSRGANPELRNKEGDTAWDLTPERSDVWFALQLNRKLRLGVGN--------RAVRTEKIICRD 1109

  Fly  1150 MERQSGN-----------KLHPPPYVKIKTNKAVPPLRFSQNLEDLSTCNCLPVDEHPCGPEAGC 1203
            :.|...|           :..|..|..|..|.....:...:|:..|..|.|  ||:  |. .:.|
  Rat  1110 VARGYENVPIPCVNGVDGEPCPEDYKYISENCETSTMNIDRNITHLQHCTC--VDD--CS-SSNC 1169

  Fly  1204 L-------------NRML--FN--------ECNPEYCKAGSLCENRMFEQRKSPRLEVVYMNERG 1245
            |             .|:|  ||        ||| :.|.....|:||:.:.....||::....:.|
  Rat  1170 LCGQLSIRCWYDKDGRLLQEFNKIEPPLIFECN-QACSCWRSCKNRVVQSGIKVRLQLYRTAKMG 1233

  Fly  1246 FGLVNREPIAVGDFVIEYVGEVINHAEFQRRMEQKQRDRDENYYFLGVEKD---FIIDAGPKGNL 1307
            :|:...:.|..|.|:.|||||:|:.||...|       .|::|.|....||   :.|||...||:
  Rat  1234 WGVRALQTIPQGTFICEYVGELISDAEADVR-------EDDSYLFDLDNKDGEVYCIDARYYGNI 1291

  Fly  1308 ARFMNHSCEPNCETQKWTVNCIH------RVGIFAIKDIPVNSELTFNY---LWDDLMNNSKKAC 1363
            :||:||.|:||....:  |..:|      |:..|:.:||....||.|:|   .||  :.:....|
  Rat  1292 SRFINHLCDPNIIPVR--VFMLHQDLRFPRIAFFSSRDIRTGEELGFDYGDRFWD--IKSKYFTC 1352

  Fly  1364 FCGAKRCSGEIGGKLKDDAVKAHAKLKQMRRAKASAVRIHVKPKKTPKVKHI 1415
            .||:::|      |...:|:    .|:|.|.|     |:...|:..|.:..:
  Rat  1353 QCGSEKC------KHSAEAI----ALEQSRLA-----RLDPHPELLPDLSSL 1389

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NSDNP_733239.1 PWWP_NSD_rpt1 395..514 CDD:438972 21/143 (15%)
PHD2_NSD 867..932 CDD:277040 14/65 (22%)
PHD3_NSD 933..988 CDD:277041 14/69 (20%)
PHD4_NSD 1001..1041 CDD:277042 8/49 (16%)
PWWP_NSD_rpt2 1048..1143 CDD:438963 27/121 (22%)
AWS 1183..1233 CDD:197795 19/72 (26%)
SET_NSD 1233..1375 CDD:380950 49/153 (32%)
Ehmt2XP_006256016.3 None

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