DRSC/TRiP Functional Genomics Resources

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Protein Alignment NSD and set-25

DIOPT Version :10

Sequence 1:NP_733239.1 Gene:NSD / 43351 FlyBaseID:FBgn0039559 Length:1427 Species:Drosophila melanogaster
Sequence 2:NP_499738.3 Gene:set-25 / 3565129 WormBaseID:WBGene00012802 Length:714 Species:Caenorhabditis elegans


Alignment Length:926 Identity:172/926 - (18%)
Similarity:279/926 - (30%) Gaps:335/926 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   548 DTSDVGSSLYDSTDNLHNKQGTQLLAV---------KRERSES--PFSPAFSPVKSKNEKRAKRR 601
            |..|:.:: |...:...|.....|.:|         ||.||||  ...|...|   :..:|.::|
 Worm    22 DEGDIRAA-YTEDEKKENIPPISLTSVSTNGAYPGQKRRRSESVRTLKPECPP---EETQRLRQR 82

  Fly   602 KLSNGTEADTGSNSMAV-----------TPSQTETTVDSSAYENPEFRQLLSAVMEYVMMNRSDE 655
            :..:.|:|...|.:|.|           ..||...:..:..:|.|            |...|..:
 Worm    83 RRISATDATQSSRTMNVIEDRKPRVNRARKSQDAPSTSTCGFETP------------VGTKRKSK 135

  Fly   656 KVEKVLLSVVSNIWSLKQIQLRELERDLASGEIEEPLGSSVVGRGSGVGTIKRLSNRLMTMMVRR 720
            ..:...        ..||.:||         :|:|...|..|...|..|                
 Worm   136 AADSQK--------PPKQSKLR---------KIDEASTSKAVDNSSKDG---------------- 167

  Fly   721 SMTPVVTPSTTPAPSEPDRRLSEPPKTKKPVNRPIEEVI----------EDILQLDSKYLFRGLS 775
                  ..:|.||.::.:||.|  ..:.:||  |||.:.          ||...:..:.....::
 Worm   168 ------KKTTKPAVTQSNRRRS--GLSLRPV--PIETIFSESSGRESSTEDEADVSHQQRVEKIA 222

  Fly   776 REPICKYCYQAGSDLVRCSRTCSSWLHADCLERKVTGAPMPKIGSRKALVIPPTSKSPSPDEDHV 840
            :.||                                           .:|:.|......|:.:.:
 Worm   223 KNPI-------------------------------------------MVVVLPLGPGNYPNNERI 244

  Fly   841 TADAKEVVAVGTSLV---CHECNVGEPEGCVICHQVESPAVPSTPRKEDSSSHTPIEDKLLTCSQ 902
            |     ||:...|.|   |:|....:..|......:..|.:|:                      
 Worm   245 T-----VVSTYKSRVNKNCNEARRAQRHGSWSRKGIAFPGIPT---------------------- 282

  Fly   903 PMCGKRFHTS-CCKY------WP--QASSSKHSARCPRHVCHTCVSDDPSGKFQQLGSSKLAKCV 958
                |:|..| ..||      ||  .|..|:.......:...||:                    
 Worm   283 ----KKFTKSDLAKYGAHASNWPAQAAFRSEEGKILIYYEGWTCL-------------------- 323

  Fly   959 RCPATYHQLS--KCIPAGTQMLNTTNIICPRHNIAKADAHVNVLWCYICVKGGELVCCETCPIAV 1021
                |.|:||  :|......:|...:|         .|..:                 ||...|.
 Worm   324 ----TLHRLSVEECARTAPTILEEMSI---------RDKFI-----------------ETVKSAA 358

  Fly  1022 HAHCRNIPIKTNESYICEECESGRLPLYGEIVWAKFNNFRWWPAIILPPTEVPSNILKKAHGEND 1086
            ....:.:..|..|:.|....:.....::.|.|                |...|.|:.        
 Worm   359 AEEAKLVVEKNQENGIELTLDEALKQIFIEPV----------------PQSSPENVF-------- 399

  Fly  1087 FVVRFFGTHDHGWISRRRVYLYIEGDTGDGHKTKSQLFRNYTTGVEE---ASRFLPIIKARRQEQ 1148
                        ||.:...|.:.. |..|..........:||..|..   |...:.|:.....::
 Worm   400 ------------WIYQDLSYFHTM-DNRDLGLAPVFYISSYTQSVRPPCYAYTAINIVDVDAYKR 451

  Fly  1149 DMERQ--------SGNKLHPPPYVKIKTN----KAVPPLRFSQNLEDLSTCNCLP---------- 1191
            .:|.:        :|.|:..|...|...|    |......|..:..|::...|.|          
 Worm   452 CLESRANMSFADLTGQKIWMPTRSKACENGTKCKCDARFMFLYDPHDVTNLECTPDGKVDFTDFK 516

  Fly  1192 VDEHPCGPEAGCLNRMLFNECNPEYCKAGSLCENRMFEQRKSPRLEVVYMN-ERGFGLVNREPIA 1255
            :|           |..:..||: :.|.....|..|..::.:...|.|.|.. |:|||:.....|.
 Worm   517 ID-----------NARIVMECS-DACGCSLDCPRRSLQRGQQHPLAVYYEGPEKGFGVRAAANIK 569

  Fly  1256 VGDFVIEYVGEV---------------INHAEFQRRMEQKQR-DRDENYYFLGVEKDFIIDAGPK 1304
            .|:.|.||.|:|               .:..|.|...|..:| |...:..|..::...||.|...
 Worm   570 AGELVCEYTGDVTLLPTSDPVASSSTKTDDGEEQENPEAPERVDSSYDAAFNAMDTKIIISAKKT 634

  Fly  1305 GNLARFMNHSCEPN-----CETQKWTVN-CIHRVGIFAIKDIPVNSELTFNYL-----WDDLMNN 1358
            ||::||:||||:|:     ..::::..: .|.||.::|||||.:..|:|..|.     |    ..
 Worm   635 GNISRFINHSCDPSSVFVEVYSRRFEEDPLIPRVAVYAIKDIALGEEITIAYYEPGIEW----KR 695

  Fly  1359 SKKACFCGAKRCSGEI 1374
            |...|.|.:.:|.|.:
 Worm   696 SSVKCRCKSTKCMGTL 711

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NSDNP_733239.1 PWWP_NSD_rpt1 395..514 CDD:438972
PHD2_NSD 867..932 CDD:277040 11/73 (15%)
PHD3_NSD 933..988 CDD:277041 9/56 (16%)
PHD4_NSD 1001..1041 CDD:277042 6/39 (15%)
PWWP_NSD_rpt2 1048..1143 CDD:438963 15/97 (15%)
AWS 1183..1233 CDD:197795 10/59 (17%)
SET_NSD 1233..1375 CDD:380950 49/170 (29%)
set-25NP_499738.3 SET <525..711 CDD:394802 54/190 (28%)
Blue background indicates that the domain is not in the aligned region.

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