DRSC/TRiP Functional Genomics Resources

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Protein Alignment NSD and suv39h1b

DIOPT Version :10

Sequence 1:NP_733239.1 Gene:NSD / 43351 FlyBaseID:FBgn0039559 Length:1427 Species:Drosophila melanogaster
Sequence 2:NP_001119954.1 Gene:suv39h1b / 326906 ZFINID:ZDB-GENE-030131-5105 Length:421 Species:Danio rerio


Alignment Length:333 Identity:77/333 - (23%)
Similarity:123/333 - (36%) Gaps:110/333 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly  1135 SRFLPIIKARRQEQDMERQSGNKLHPPP-----------------------------YVKIKTNK 1170
            |:|...:.|..|.|: :|.:..:|.|..                             |:.::...
Zfish    97 SQFWEDLNAEMQRQN-KRSAPRRLDPATVTHLTQRAKLRQTLKQWETHLNSLGTHKGYISVRNQV 160

  Fly  1171 AV--PPLRFSQ----------NLEDLST-CNCLPVDEHPC--GPEAGCL-----NRMLFN----- 1210
            .:  ||..|:.          .|.::|. |.|.     .|  .|..||.     ::..:|     
Zfish   161 DLEGPPKSFTYINDYKVGDGILLNEVSVGCECT-----DCLASPVEGCCAGASQHKFAYNELGQV 220

  Fly  1211 ---------ECNPEYCKAGSLCENRMFEQRKSPRLEVVYM---NERGFGLVNREPIAVGDFVIEY 1263
                     ||| :.|:.|..|.||:.:  :..|..:...   |.||:|:...|.|....||:||
Zfish   221 RIRPGLPIYECN-KRCRCGPDCSNRVVQ--RGIRYSLCIFRTDNGRGWGVRTMERIRKNTFVMEY 282

  Fly  1264 VGEVINHAEFQRRMEQKQRDR-----DENYYFLGVEKDFIIDAGPKGNLARFMNHSCEPNCETQK 1323
            |||:|...|.:||.....::.     |.:|    |:.::.:||...||::.|:||||:||.:...
Zfish   283 VGEIITTEEAERRGHVYDKEGATYLFDLDY----VDDEYTVDAAHYGNISHFVNHSCDPNLQVYN 343

  Fly  1324 WTVNCIH----RVGIFAIKDIPVNSELTFNYLWD------------------DLMNNSKK----A 1362
            ..::.:.    |:..||.:.|....||||:|...                  .|..:.||    .
Zfish   344 VFIDNLDERLPRIAFFATRGIKAGEELTFDYNMKIDPVDAESTKMDTNFGVMGLPGSPKKRMRVE 408

  Fly  1363 CFCGAKRC 1370
            |.||...|
Zfish   409 CKCGVATC 416

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NSDNP_733239.1 PWWP_NSD_rpt1 395..514 CDD:438972
PHD2_NSD 867..932 CDD:277040
PHD3_NSD 933..988 CDD:277041
PHD4_NSD 1001..1041 CDD:277042
PWWP_NSD_rpt2 1048..1143 CDD:438963 2/7 (29%)
AWS 1183..1233 CDD:197795 16/71 (23%)
SET_NSD 1233..1375 CDD:380950 48/172 (28%)
suv39h1bNP_001119954.1 CD_SUV39H1_like 45..99 CDD:349289 1/1 (100%)
SET 167..421 CDD:394802 66/262 (25%)
Blue background indicates that the domain is not in the aligned region.

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