DRSC/TRiP Functional Genomics Resources

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Protein Alignment NSD and Ezh1

DIOPT Version :10

Sequence 1:NP_733239.1 Gene:NSD / 43351 FlyBaseID:FBgn0039559 Length:1427 Species:Drosophila melanogaster
Sequence 2:NP_001100521.1 Gene:Ezh1 / 303547 RGDID:1305028 Length:747 Species:Rattus norvegicus


Alignment Length:335 Identity:87/335 - (25%)
Similarity:131/335 - (39%) Gaps:79/335 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly  1069 PP----TEVPSNILKKAHGENDFVVRFFGTHDHGWISRRRVYLYIEGDTGDGHKTKSQLFRNYTT 1129
            ||    .|.||..::....|......|.||:.:.:.|..|:.         |.||..|:|:   .
  Rat   419 PPQLCVVEAPSEPVEWTGAEESLFRVFHGTYFNNFCSIARLL---------GTKTCKQVFQ---F 471

  Fly  1130 GVEEASRF-LPIIKARRQEQDMERQSGNKLHPPPYVKIKTNKAVPPLRFSQNLEDL--------- 1184
            .|:|:... ||..:.....|..:|:  ::|......||:..|       ..|...:         
  Rat   472 AVKESLILKLPTDELMNPSQKKKRK--HRLWAAHCRKIQLKK-------DNNSTQVYNYQPCDHP 527

  Fly  1185 -----STCNCLPVDEH-----PCGPEAGCLNR------------------MLFNECNPEY----- 1216
                 |||.|:.....     .|.|:  |.||                  :...||:|:.     
  Rat   528 DRPCDSTCPCIMTQNFCEKFCQCSPD--CQNRFPGCRCKTQCNTKQCPCYLAVRECDPDLCLTCG 590

  Fly  1217 ------CKAGSLCENRMFEQRKSPRLEVVYMNERGFGLVNREPIAVGDFVIEYVGEVINHAEFQR 1275
                  ||..| |:|...::.....|.:...:..|:|...:|.:...:|:.||.||:|:..|..|
  Rat   591 ASEHWDCKVVS-CKNCSIQRGLKKHLLLAPSDVAGWGTFIKESVQKNEFISEYCGELISQDEADR 654

  Fly  1276 RMEQKQRDRDENYYFLGVEKDFIIDAGPKGNLARFMNHSCEPNCETQKWTVNCIHRVGIFAIKDI 1340
            |  .|..|:..:.:...:..||::||..|||..||.|||..|||..:...||..||:||||.:.|
  Rat   655 R--GKVYDKYMSSFLFNLNNDFVVDATRKGNKIRFANHSVNPNCYAKVVMVNGDHRIGIFAKRAI 717

  Fly  1341 PVNSELTFNY 1350
            ....||.|:|
  Rat   718 QAGEELFFDY 727

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NSDNP_733239.1 PWWP_NSD_rpt1 395..514 CDD:438972
PHD2_NSD 867..932 CDD:277040
PHD3_NSD 933..988 CDD:277041
PHD4_NSD 1001..1041 CDD:277042
PWWP_NSD_rpt2 1048..1143 CDD:438963 20/78 (26%)
AWS 1183..1233 CDD:197795 17/97 (18%)
SET_NSD 1233..1375 CDD:380950 43/118 (36%)
Ezh1NP_001100521.1 EZH2_WD-Binding 39..68 CDD:463308
PRC2_HTH_1 159..262 CDD:436286
SANT 433..474 CDD:238096 11/52 (21%)
preSET_CXC 560..591 CDD:408079 3/30 (10%)
SET_EZH1 608..743 CDD:380994 43/122 (35%)
Blue background indicates that the domain is not in the aligned region.

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