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Protein Alignment NSD and Suv39h1

DIOPT Version :10

Sequence 1:	NP_733239.1	Gene:	NSD / 43351	FlyBaseID:	FBgn0039559	Length:	1427	Species:	Drosophila melanogaster
Sequence 2:	NP_001100426.1	Gene:	Suv39h1 / 302553	RGDID:	1565028	Length:	413	Species:	Rattus norvegicus

Alignment Length:	291	Identity:	76/291 - (26%)
Similarity:	113/291 - (38%)	Gaps:	68/291 - (23%)

- Green bases have known domain annotations that are detailed below.

  Fly  1142 KARRQEQDMERQSGNK--------------LHPPP--YVKIKTNKAVPPLRFSQNLEDLSTCNCL 1190
            |.||..|..|::...|              |..||  :|.|...:....:..:|........:||
  Rat   124 KQRRALQRWEQELNAKRSHLGRITVENEVDLDGPPRSFVYINEYRVGEGITLNQVAVGCECQDCL 188

  Fly  1191 PVDEHPCGPEAGCLNRMLFN--------------ECNPEYCKAGSLCENRMFEQRKSPRLEVVYM 1241
            ......|.|.|. |::..:|              |||...| .|..|.||:.::.....|.:...
  Rat   189 LAPTGGCCPGAS-LHKFAYNDQGQVRLKAGQPIYECNSRCC-CGYDCPNRVVQKGIRYNLCIFRT 251

  Fly  1242 NE-RGFGLVNREPIAVGDFVIEYVGEVINHAEFQRRMEQKQRDR-----DENYYFLGVEKDFIID 1300
            :: ||:|:...|.|....||:|||||:|...|.:||.:...|..     |.:|    ||..:.:|
  Rat   252 DDGRGWGVRTLEKIRKNSFVMEYVGEIITSEEAERRGQIYDRQGATYLFDLDY----VEDVYTVD 312

  Fly  1301 AGPKGNLARFMNHSCEPNCETQKWTVNCIH----RVGIFAIKDIPVNSELTFNYLWD-------- 1353
            |...||::.|:||||:||.:.....::.:.    |:..||.:.|....||||:|...
  Rat   313 AAYYGNISHFVNHSCDPNLQVYNVFIDNLDERLPRIAFFATRTIWAGEELTFDYNMQVDPVDMES 377

  Fly  1354 ----------DLMNNSKK----ACFCGAKRC 1370
                      .|..:.||    .|.||...|
  Rat   378 TRMDSNFGLAGLPGSPKKRVRIECKCGTTAC 408

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 592.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.