DRSC/TRiP Functional Genomics Resources

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Protein Alignment NSD and set-12

DIOPT Version :10

Sequence 1:NP_733239.1 Gene:NSD / 43351 FlyBaseID:FBgn0039559 Length:1427 Species:Drosophila melanogaster
Sequence 2:NP_509306.2 Gene:set-12 / 187229 WormBaseID:WBGene00019584 Length:389 Species:Caenorhabditis elegans


Alignment Length:226 Identity:77/226 - (34%)
Similarity:107/226 - (47%) Gaps:20/226 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly  1190 LPVDEHPCGPEAGCLNRMLFNECNPEYCKAG-SLCENRMFEQRKSPRLEVVYM-NERGFGLVNRE 1252
            |.|....||.:  |......|..|...|..| |.|||:.|.:|:...:|.... |..|.||...|
 Worm    52 LTVTSCKCGTD--CTTEECSNFANHRECPRGCSNCENQRFRKRQFCGVETFLTDNGIGHGLRATE 114

  Fly  1253 PIAVGDFVIEYVGEVINHAEFQRRMEQKQRDRDENYYFLGVEKDFIIDAGPKGNLARFMNHSCEP 1317
            .||.|..::||.||.|..||..:|:::.::|..::.|...|.:::.:|...|||.|||:||||.|
 Worm   115 EIATGKLILEYRGEAITKAEHNKRVKRYKKDGIKHSYSFEVGRNYYVDPTRKGNSARFINHSCNP 179

  Fly  1318 NCETQKWTV--NCIHRVGIFAIKDIPVNSELTFNYLWDDLMNNSKKACFCGAKRCSGEIGGKLKD 1380
            |...:.|||  ..:..:||||.|.|....|:||:|   .....:.:.|.||...|.|.||.....
 Worm   180 NALVKVWTVPDRPMKSLGIFASKVIKPGEEITFDY---GTSFRNDQPCQCGEAACRGWIGKPSTS 241

  Fly  1381 DAVKAHAK-LKQMRRAKASAVRIHVKPKKTP 1410
            :..|..:| ||:..|          |||..|
 Worm   242 EVPKDVSKELKKRGR----------KPKMDP 262

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NSDNP_733239.1 PWWP_NSD_rpt1 395..514 CDD:438972
PHD2_NSD 867..932 CDD:277040
PHD3_NSD 933..988 CDD:277041
PHD4_NSD 1001..1041 CDD:277042
PWWP_NSD_rpt2 1048..1143 CDD:438963
AWS 1183..1233 CDD:197795 15/43 (35%)
SET_NSD 1233..1375 CDD:380950 51/144 (35%)
set-12NP_509306.2 AWS 53..94 CDD:197795 14/42 (33%)
SET 97..236 CDD:394802 51/141 (36%)
Blue background indicates that the domain is not in the aligned region.

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