DRSC/TRiP Functional Genomics Resources

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Protein Alignment NSD and set-11

DIOPT Version :10

Sequence 1:NP_733239.1 Gene:NSD / 43351 FlyBaseID:FBgn0039559 Length:1427 Species:Drosophila melanogaster
Sequence 2:NP_001364763.1 Gene:set-11 / 185242 WormBaseID:WBGene00018023 Length:278 Species:Caenorhabditis elegans


Alignment Length:193 Identity:60/193 - (31%)
Similarity:81/193 - (41%) Gaps:30/193 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly  1200 EAGCLNRM------LFNECNPEYCKAGSLCENRMFEQRKSPRLEVVYMNE-RGFGLVNREPIAVG 1257
            |.|.:..|      ...||| |||.....|.||:.::.....:|:...:. .|:|:.....||.|
 Worm    94 EGGTVENMELLMWDTVRECN-EYCNCALWCGNRVAQKGAMYPVEIFARDPWCGWGVRASVDIAFG 157

  Fly  1258 DFVIEYVGEVINHAEFQRRMEQKQRDRDENYYF---LGVEKDFIIDAGPKGNLARFMNHSCEPNC 1319
            .|:.||.||:|:..|...|       .|..:.|   :|.| ...|||...||..||:||||.||.
 Worm   158 TFIGEYAGELIDDEEAMDR-------HDSTFLFETKVGSE-TLTIDAKYSGNYTRFINHSCAPNV 214

  Fly  1320 ETQ--KW---TVNCIHRVGIFAIKDIPVNSELTFNY--LWDDLMNNSKKACFCGAKRCSGEIG 1375
            :..  .|   .:..|| :..|..|.|....|||.:|  .|   ..|.|..|.|.:..|..:.|
 Worm   215 KVANISWDYDKIQLIH-MCFFTDKAIRKGEELTIDYGEAW---WANKKFPCLCKSSECRYQFG 273

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NSDNP_733239.1 PWWP_NSD_rpt1 395..514 CDD:438972
PHD2_NSD 867..932 CDD:277040
PHD3_NSD 933..988 CDD:277041
PHD4_NSD 1001..1041 CDD:277042
PWWP_NSD_rpt2 1048..1143 CDD:438963
AWS 1183..1233 CDD:197795 12/38 (32%)
SET_NSD 1233..1375 CDD:380950 47/152 (31%)
set-11NP_001364763.1 PreSET 21..117 CDD:128744 8/23 (35%)
SET 75..270 CDD:394802 59/188 (31%)
Blue background indicates that the domain is not in the aligned region.

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