DRSC/TRiP Functional Genomics Resources

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Protein Alignment NSD and set-8

DIOPT Version :10

Sequence 1:NP_733239.1 Gene:NSD / 43351 FlyBaseID:FBgn0039559 Length:1427 Species:Drosophila melanogaster
Sequence 2:NP_001359546.1 Gene:set-8 / 184086 WormBaseID:WBGene00008527 Length:407 Species:Caenorhabditis elegans


Alignment Length:504 Identity:109/504 - (21%)
Similarity:179/504 - (35%) Gaps:171/504 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   929 CPRHVCHTCVSDDPSGKFQQLGSSKLAKCVRCPAT---YHQLSKCIPAGTQMLNTTNI-ICPR-- 987
            ||.|:|..|.::.    |:  .|:.|...:...:|   :|  |.|:|||....|...: :.||  
 Worm     3 CPDHICEICFTEG----FE--SSATLGNLLHEQSTIRAFH--SSCMPAGYTEKNAGVVSLNPRIQ 59

  Fly   988 -----HNIAKADAHVNVLWCYIC-VKGGELVCCETCPIAVHAHCRNIPIK-TNESYI-CEECESG 1044
                 |..|          |..| .....::.|..|..:.|..|  .|:| |.||.. ||.|...
 Worm    60 EFLGTHFPA----------CGTCGTSTPPMIKCSGCVHSFHRAC--FPMKLTEESKSHCESCVFD 112

  Fly  1045 -RLPLYGEIVWAKFNNFRWWPAIILPPTEVPSNILKKAHGENDFVVRFFGTHDHGWISRRRVYLY 1108
             |:.:..|::..|...|             .|.:::      |:....|...|..:         
 Worm   113 IRMRIGDEVLTEKDEIF-------------CSGVIE------DWNQNHFAKQDENF--------- 149

  Fly  1109 IEGDTG------DGHKTK-----SQLFRNYTTGVEEASRFLPII--------KARRQE------- 1147
              |..|      ||..::     :.|||.|       ||...||        ....||       
 Worm   150 --GKEGFASILFDGVGSRQILPINSLFRPY-------SRVTNIIFHSIKSMYNGHPQELENLKSM 205

  Fly  1148 -QDMERQSGNKLHPPPYVKIKTNKAVPPLR----FSQNLEDLSTCNCLPVDEHPCGPEAGCLNRM 1207
             |.:|.|     .||      .::.:|..:    |...:::| .|:                   
 Worm   206 LQKIESQ-----RPP------VSRPIPKFQSISIFHSTIKEL-LCH------------------- 239

  Fly  1208 LFNECNPEYCKAGSLCENRMFEQRKSPRLEVVYMNERGFGLVNREPIAVGDFVIEYVGEVINHAE 1272
                 :.::......||:.:.:..|:          :|:|:...:.:..|..:.:|.||.|:..|
 Worm   240 -----DDDFLPNVKTCEDLLLKFEKN----------KGYGVFATKILENGCVIGQYCGEYISEKE 289

  Fly  1273 FQRR--MEQKQRDRDENYYFLGVEKDFI---------IDAGPKGNLARFMNHSCEPNCE--TQKW 1324
            ..||  :.:...|::..:|...|:.:.:         :|.....|:...:|.||||||.  .::.
 Worm   290 KARRDALAKVCNDKECKFYSFQVKLELLNELQAQKVYVDGSSVKNITAILNTSCEPNCTAIVEEI 354

  Fly  1325 TVNCIHRVGIFAIK---DIPVNSELTFNYLWDDLMNNSKKACFCGAKRC 1370
            ::..| |:....||   .|.|..|||.||.|     ||...||||:::|
 Worm   355 SIQNI-RIEYIVIKTKRTIKVGEELTINYKW-----NSSFKCFCGSEKC 397

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NSDNP_733239.1 PWWP_NSD_rpt1 395..514 CDD:438972
PHD2_NSD 867..932 CDD:277040 2/2 (100%)
PHD3_NSD 933..988 CDD:277041 15/65 (23%)
PHD4_NSD 1001..1041 CDD:277042 13/42 (31%)
PWWP_NSD_rpt2 1048..1143 CDD:438963 19/113 (17%)
AWS 1183..1233 CDD:197795 4/49 (8%)
SET_NSD 1233..1375 CDD:380950 41/154 (27%)
set-8NP_001359546.1 SET 251..389 CDD:214614 38/153 (25%)
Blue background indicates that the domain is not in the aligned region.

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