DRSC/TRiP Functional Genomics Resources

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Protein Alignment NSD and kmt2b

DIOPT Version :10

Sequence 1:NP_733239.1 Gene:NSD / 43351 FlyBaseID:FBgn0039559 Length:1427 Species:Drosophila melanogaster
Sequence 2:XP_002940678.3 Gene:kmt2b / 100144721 XenbaseID:XB-GENE-853845 Length:2817 Species:Xenopus tropicalis


Alignment Length:1372 Identity:267/1372 - (19%)
Similarity:419/1372 - (30%) Gaps:488/1372 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    95 QKQQQQRVSMVNRKRDLINLQSALSPKYIGYANANSPTPLSDSDDTIRTTRRRVNQAAALNNSSA 159
            |:|.:..|.......|...:::|.||          |.|...|....:....:.|.:|....|..
 Frog  1833 QEQNKTIVHSPGPLPDPTEMEAAFSP----------PLPADTSSSCGQPPPLQPNTSATAPRSFI 1887

  Fly   160 GETLAHDNASP-RTPGGGGGGGGDDSANQLLSKTYMSPIEKLLIKNGASSPNSTGFE---AGSED 220
            |..:...|.|| |.|.||.            |:...||          .||.|:...   ....|
 Frog  1888 GARMKTPNYSPSRRPLGGS------------SRPLPSP----------GSPTSSSLSHHILTVSD 1930

  Fly   221 LGIRPIVRKHVKRKMKRVPKAKVTLELDEKNQQEVDEKS-VKTEP-IDEEVDRTDEAPTQEAQTT 283
            ..:.|:     :|..:.||.::.......::.:|....| :...| |.......:|.||..:...
 Frog  1931 PEVTPL-----RRTRRPVPPSRFNAPSSTRSPEETTSPSPLPARPVIRHRATSENEVPTPASCGG 1990

  Fly   284 AISIKSETEAEHKAAVDVHIKQEDTIRLDIVNNPVESTSIVITEEPKDLEKSTEELAFALPLASS 348
            |..::..:.::..|.:                .|..:..||.:|.....|:..::..:.|   :.
 Frog  1991 ASEVEVMSSSDGGALL----------------GPCGAQLIVGSEGDSSSEEDADDQYYGL---TR 2036

  Fly   349 TEVDLKSPPDLSSTALATSIKSPSSVSIDSAKGLSIVTDPGWPTYQVGDLFWGKVFSYCFWPCMV 413
            |.|        |...:::...|.|||.|....|:...||.       .|...|        ||  
 Frog  2037 TVV--------SGDKISSMPASASSVHIRQLDGIHDSTDS-------EDGSQG--------PC-- 2076

  Fly   414 CPDPLGQIVGNMPSHPQRSSLDNANVPIQVHVRFFADNGRRNWIKPENLLTFAGLKAFDDMREEL 478
              .|:|.  |..|||          :|.:: |.|.                   ||...:....:
 Frog  2077 --GPIGG--GKTPSH----------IPSEI-VEFV-------------------LKNTGNSESSI 2107

  Fly   479 RIKH-GP------KSAKYRQMVPKRTKVVIWRQAIEEAQAMTQIPYSD--RLEKFYQTYENVVTL 534
            ::.| ||      .|:.........|.:.....|:....:....|..|  :|::......:|.|.
 Frog  2108 QLHHIGPPASVASSSSSSSAQNGDATLLSNGNGAVSRQPSQGPPPLRDPPQLQRVCHPLISVPTK 2172

  Fly   535 NRQKRKRTKYMMQDTSDVGSSLYDSTDNLHNKQGTQLLAVKRERSESPF---------------- 583
            |          ..|...|..::......|.||.|..|:.|:...:|.|.                
 Frog  2173 N----------TYDAPPVSVNVPTPKVILLNKMGQVLVKVENGNAEQPLLRETSKAERVTALALP 2227

  Fly   584 -SPAFSPVK--SKNEKRAKRRKLSNGTEADTGSNSMAVTPSQTETTVDSSAYENPEFRQLLSAVM 645
             .||...||  .||.|                 |.::..|....|.:..|               
 Frog  2228 KLPAVKHVKVAPKNAK-----------------NPLSGLPHPQPTPLSPS--------------- 2260

  Fly   646 EYVMMNRSDEKVEKVLLSVVSNI-----WSLKQIQLRELERDLASGEIEEPLGSSVVGRGSGVGT 705
                ||       .|:|...|:|     |:|....:|.:           |:.:.:.|.|.    
 Frog  2261 ----MN-------TVILQATSSINPGQSWTLSTPVVRVV-----------PMLNVMQGTGQ---- 2299

  Fly   706 IKRLSNRLMTMMVRRSMTPVVT----------------------------PSTTPAPSEPDRRLS 742
                    :|:..:..|||.:|                            |...||| :|..||.
 Frog  2300 --------ITLGTQALMTPAITGIPQTCLLQNVPINSGVLSVASSVQPQQPQLKPAP-QPQARLQ 2355

  Fly   743 EPPKTKKPVNRPIEEVIEDILQLDSKYLFRGLSREPICKYCYQAGSDLVRCSRTCSSWLHADCLE 807
            ..|:.......|::     ::.|.|..    |.|.|:             .|.||     ....:
 Frog  2356 VQPQLSVLQPTPVK-----VVSLPSLC----LKRPPL-------------PSSTC-----FPVKK 2393

  Fly   808 RKVTGAPMPKIGSRKALVIPPTSKSPSPD------------EDHVTADAKEVVAVGTSLVCHECN 860
            .|:.....||:|.:..:.:..:|...|.|            ...:.|...:.|...|||...|.:
 Frog  2394 PKLEQTDGPKVGDKTDISVISSSVVLSADPASSSVAGTRLNRARIKAPMVQEVLDLTSLKDEEQS 2458

  Fly   861 VGEPEGCVICHQVESPAVPSTPRKEDSSSHTPIEDKLLTCSQPMCGKRFHTSCCKYWPQ-ASSSK 924
            :.  :|..|       .:....:.|||...||::...|  :.|:          :|.|. .:..:
 Frog  2459 LN--DGLFI-------DLTLAVKDEDSQEETPVDSPSL--APPL----------EYIPNFENEEE 2502

  Fly   925 HSARCPR----HVCHTCVSDDPSGKFQQLGSSKLA-KCV-------RCPATYHQLS-KCIPAGTQ 976
            ..:..||    ::.....|:|  |.:.|..|::.| |.|       |.......|| .....||:
 Frog  2503 KKSSVPRRDGPYLRFEITSED--GFYIQADSAEDAWKAVLEKVQETRGVGKLRHLSLSASMIGTR 2565

  Fly   977 MLNTTNIICPRHNIAKADAHVNVLWCYICVKGGELVCCETCPIAVHAHCRNIPIKTNESYICEEC 1041
            |...              .|..||:....:.|.|             .||..             
 Frog  2566 MFGV--------------QHDAVLFLLEQLTGAE-------------RCRGY------------- 2590

  Fly  1042 ESGRLPLYGEIVWAKFNNFRWWPAIILPPTEVPSNILKKAHGENDFVVRFFGTHDHGWISRRRVY 1106
                          ||         :..|.||       ..||       ..|:..| .:|..||
 Frog  2591 --------------KF---------LFHPQEV-------EEGE-------ISTNPSG-CARSEVY 2617

  Fly  1107 LYIEGDTGDGHKTKSQLFRNYTTGVEEASRFLPIIKARRQEQDMERQSGNKLHPPPYVKIKTNKA 1171
            :         .|:...:| |:   :....|.||.|....:|::             .|::|:.:.
 Frog  2618 V---------RKSTFDMF-NF---LASQHRTLPEIGPCEEEEE-------------EVQLKSTRR 2656

  Fly  1172 VPPLRFSQNLEDLSTCNCLPVDEHPCGPEAGCLNRMLFNECNPEYCKAGSLCENRMFEQRKSPRL 1236
            ...|       ||              |.|     |.|...                 ::.|...
 Frog  2657 ATSL-------DL--------------PMA-----MRFRHL-----------------KKTSKEA 2678

  Fly  1237 EVVYMNE-RGFGLVNREPIAVGDFVIEYVGEVINHAEFQRRMEQKQRDRDENYYFLGVEKDFIID 1300
            ..||.:. .|.||..:..|..|:.||||.|.||......:| |:....:....|...::...::|
 Frog  2679 VGVYRSAIHGRGLFCKRNIDAGEMVIEYSGIVIRSVLTDKR-EKFYDSKGIGCYMFRIDDFDVVD 2742

  Fly  1301 AGPKGNLARFMNHSCEPNCETQKWTVNCIHRVGIFAIKDIPVNSELTFNYLW--DDLMNNSKKAC 1363
            |...||.|||:||||||||.::...|.....:.|||::.|....|||::|.:  :|..|  |..|
 Frog  2743 ATMHGNAARFINHSCEPNCYSRVIHVEGQKHIVIFALRSIYRGEELTYDYKFPIEDASN--KLPC 2805

  Fly  1364 FCGAKRC 1370
            .||||:|
 Frog  2806 NCGAKKC 2812

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NSDNP_733239.1 PWWP_NSD_rpt1 395..514 CDD:438972 21/125 (17%)
PHD2_NSD 867..932 CDD:277040 12/69 (17%)
PHD3_NSD 933..988 CDD:277041 14/63 (22%)
PHD4_NSD 1001..1041 CDD:277042 4/39 (10%)
PWWP_NSD_rpt2 1048..1143 CDD:438963 19/94 (20%)
AWS 1183..1233 CDD:197795 6/49 (12%)
SET_NSD 1233..1375 CDD:380950 51/141 (36%)
kmt2bXP_002940678.3 zf-CXXC 1011..1058 CDD:366873
PHD1_KMT2B 1233..1279 CDD:277064
PHD2_KMT2A_like 1281..1330 CDD:276982
PHD3_KMT2B 1367..1423 CDD:277068
Bromodomain 1406..1548 CDD:445827
ePHD_KMT2B 1617..1721 CDD:277164
FYRN 1768..1815 CDD:461787
PHA03307 1824..>2091 CDD:223039 69/352 (20%)
DUF5585 <2215..>2395 CDD:465521 45/273 (16%)
FYRC 2512..2595 CDD:461788 23/147 (16%)
SET_KMT2A_2B 2664..2817 CDD:380947 54/174 (31%)
Blue background indicates that the domain is not in the aligned region.

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