DRSC/TRiP Functional Genomics Resources

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Protein Alignment NSD and nsd2

DIOPT Version :10

Sequence 1:NP_733239.1 Gene:NSD / 43351 FlyBaseID:FBgn0039559 Length:1427 Species:Drosophila melanogaster
Sequence 2:XP_002936809.1 Gene:nsd2 / 100125213 XenbaseID:XB-GENE-988824 Length:1298 Species:Xenopus tropicalis


Alignment Length:42 Identity:11/42 - (26%)
Similarity:17/42 - (40%) Gaps:11/42 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   175 YASYYMMNISLLALINEYIYFTVHIRRLFMIVNRLLKQLLLG 216
            |......::|...|.::|::          .||. .||.|||
 Frog   178 YQQNPQQSLSCSTLASQYLH----------CVNG-AKQSLLG 208

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NSDNP_733239.1 PWWP_NSD_rpt1 395..514 CDD:438972
PHD2_NSD 867..932 CDD:277040
PHD3_NSD 933..988 CDD:277041
PHD4_NSD 1001..1041 CDD:277042
PWWP_NSD_rpt2 1048..1143 CDD:438963
AWS 1183..1233 CDD:197795
SET_NSD 1233..1375 CDD:380950
nsd2XP_002936809.1 PWWP_NSD2_rpt1 190..317 CDD:438990 9/30 (30%)
HMG-box_NSD2 408..469 CDD:438807
TNG2 <484..654 CDD:227367
PHD1_NSD1_2 613..655 CDD:277118
PHD2_NSD2 660..706 CDD:277121
PHD3_NSD2 707..760 CDD:277124
PHD4_NSD2 777..817 CDD:277127
PWWP_NSD2_rpt2 823..918 CDD:438993
AWS 967..1004 CDD:465559
SET_NSD2 1006..1147 CDD:380988
PHD5_NSD2 1185..1227 CDD:277130
C5HCH 1226..1273 CDD:465605
Blue background indicates that the domain is not in the aligned region.

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