DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mino and plsB

DIOPT Version :10

Sequence 1:NP_651597.1 Gene:mino / 43350 FlyBaseID:FBgn0027579 Length:850 Species:Drosophila melanogaster
Sequence 2:NP_418465.4 Gene:plsB / 948541 ECOCYCID:EG10740 Length:807 Species:Escherichia coli


Alignment Length:678 Identity:168/678 - (24%)
Similarity:282/678 - (41%) Gaps:151/678 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   125 SEKFEYRQVTEIVHNDAVLKHAIKQAAEQTLREQRYAKNGHRLLTR--------SASGDQEAQEE 181
            |.....|::.:....|..:...:.:.|......||.|..|.||..|        ::....:|.|:
E. coli   168 SPSVSLRRMADEHGTDKTIAQKLARVARMHFARQRLAAVGPRLPARQDLFNKLLASRAIAKAVED 232

  Fly   182 EDEKRGISYQAILRKQEQRAISILKDMGST-------LNNGLLAFTSWILYKLLPCFLSGV-VTN 238
            |...:.||::    |.:|.||::::::.:.       |.:.:|.||...||:       |: |.|
E. coli   233 EARSKKISHE----KAQQNAIALMEEIAANFSYEMIRLTDRILGFTWNRLYQ-------GINVHN 286

  Fly   239 TKQIEMLKTATERSPGTPLIFVPLHRSHLDYIMVTWILTNNDIRSPLVAAGNNLQIPVFGGLLRG 303
            .:::..|     ...|..|::||.||||:||::::::|.:..:..|.:|||.||.....|.:.|.
E. coli   287 AERVRQL-----AHDGHELVYVPCHRSHMDYLLLSYVLYHQGLVPPHIAAGINLNFWPAGPIFRR 346

  Fly   304 LGAFFIKRKIDPVEGKKDVLYRAALHLYLTHALKQGHNVEFFIEGGRTRTGKPCMPKGGILSVIV 368
            ||||||:|..   :|.|  ||......||.....:|::||:|:||||:|||:...||.|.||:.:
E. coli   347 LGAFFIRRTF---KGNK--LYSTVFREYLGELFSRGYSVEYFVEGGRSRTGRLLDPKTGTLSMTI 406

  Fly   369 NAFMDGSIPDALLVPVSVNYERLVD-GNFVREQKGEKKIPESFGKAISGIWKALKSNYGLMRIDF 432
            .|.:.|......|:|:.:.||.::: |.:.:|.:|..|..||..:.:.|:.|.  .|.|...::|
E. coli   407 QAMLRGGTRPITLIPIYIGYEHVMEVGTYAKELRGATKEKESLPQMLRGLSKL--RNLGQGYVNF 469

  Fly   433 NEPYSIRELVNSYNKIAREDGNIAKVYKPSARVLQHNQSTSSLYGTDVVCEEHRNLIESISRQVV 497
            .||..:...:|.:....||..:..:..:|:......|...:.|                   .|.
E. coli   470 GEPMPLMTYLNQHVPDWRESIDPIEAVRPAWLTPTVNNIAADL-------------------MVR 515

  Fly   498 FDCAAATSVMSTNALAFLLLTRFRNGAEEQILSEA---LDDLRNSLSGCKDIGFSGESSQIVAYA 559
            .:.|.|.:.|:....| ||.:|.|:...||:..:.   ||.:||       :.:|.:|:...|.|
E. coli   516 INNAGAANAMNLCCTA-LLASRQRSLTREQLTEQLNCYLDLMRN-------VPYSTDSTVPSASA 572

  Fly   560 CDLLGSGLVTR----SRDENGRLVIKAVNSVESFIELAYYSNMLTPHFALSSIL--LTTFHSLLP 618
            .:|:...|...    .:|..|.::|.   ..|..:.:.||.|.:.....|.|::  :.|.|    
E. coli   573 SELIDHALQMNKFEVEKDTIGDIIIL---PREQAVLMTYYRNNIAHMLVLPSLMAAIVTQH---- 630

  Fly   619 ETENKKEAAVSRKKLIDTALENCQIYRYEFILNKPTQVLENLLYQQLD-DLLISGCVLTEKLHDD 682
                   ..:||    |..:|:.                 |:||..|. :|.:...      .|:
E. coli   631 -------RHISR----DVLMEHV-----------------NVLYPMLKAELFLRWD------RDE 661

  Fly   683 LPNGAEGRRLANVLAECLDEDGYEDVRDGEAD-EP------KLLFASETPSQQRYICEVLAPFAW 740
            ||:      :.:.||..:...|...::|.|.. .|      :||.|....:.|||     |...|
E. coli   662 LPD------VIDALANEMQRQGLITLQDDELHINPAHSRTLQLLAAGARETLQRY-----AITFW 715

  Fly   741 TYV---------------TVAQSLQILH 753
            ...               ||||.|.:||
E. coli   716 LLSANPSINRGTLEKESRTVAQRLSVLH 743

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
minoNP_651597.1 PlsB 185..>658 CDD:442180 125/490 (26%)
LPLAT_DHAPAT-like 232..443 CDD:153255 71/212 (33%)
plsBNP_418465.4 PRK04974 1..806 CDD:235325 168/678 (25%)

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