DRSC/TRiP Functional Genomics Resources

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Protein Alignment mino and Gpam

DIOPT Version :9

Sequence 1:NP_001247343.2 Gene:mino / 43350 FlyBaseID:FBgn0027579 Length:850 Species:Drosophila melanogaster
Sequence 2:NP_058970.1 Gene:Gpam / 29653 RGDID:61847 Length:828 Species:Rattus norvegicus


Alignment Length:738 Identity:206/738 - (27%)
Similarity:377/738 - (51%) Gaps:91/738 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   133 VTEIVHNDAVLKHAIKQAAEQTLREQRYAKNGHRLLTRSASGDQEAQEEEDEKRGISYQAILRKQ 197
            :|:.|.|.:.::.||.:.|.:              |....|..|:::             .::|.
  Rat   129 ITDNVLNSSRVQEAIAEVAAE--------------LNPDGSAQQQSK-------------AIQKV 166

  Fly   198 EQRAISILKDMGSTLNNGLLAFTSWILYKLLPCFLSGVVTNTKQIEMLKTATERSPGTPLIFVPL 262
            :::|..||::|.:|::.|::..|.|:|.||...|...:..:..|:||:|.|||.:  .||:|:|:
  Rat   167 KRKARKILQEMVATVSPGMIRLTGWVLLKLFNSFFWNIQIHKGQLEMVKAATETN--LPLLFLPV 229

  Fly   263 HRSHLDYIMVTWILTNNDIRSPLVAAGNNLQIPVFGGLLRGLGAFFIKRKIDPV-EGKKDVLYRA 326
            ||||:||:::|:||..::|::|.:|:||||.||:|..|:..||.|||:|::|.. :|:||:||||
  Rat   230 HRSHIDYLLLTFILFCHNIKAPYIASGNNLNIPIFSTLIHKLGGFFIRRRLDETPDGRKDILYRA 294

  Fly   327 ALHLYLTHALKQGHNVEFFIEGGRTRTGKPCMPKGGILSVIVNAFMDGSIPDALLVPVSVNYERL 391
            .||.::...|:|...:|.|:||.|:|:||....:.|:|||:|:.....:|||.|::||.::|:|:
  Rat   295 LLHGHIVELLRQQQFLEIFLEGTRSRSGKTSCARAGLLSVVVDTLSSNTIPDILVIPVGISYDRI 359

  Fly   392 VDGNFVREQKGEKKIPESFGKAISGIWKALKSNYGLMRIDFNEPYSIRELVNSYNK------IAR 450
            ::|::..||.|:.|..||......|:.:.|:.|||.:|:||.:|:|::|.:...::      ::.
  Rat   360 IEGHYNGEQLGKPKKNESLWSVARGVIRMLRKNYGYVRVDFAQPFSLKEYLEGQSQKPVSAPLSL 424

  Fly   451 EDGNIAKVY--KPSARVLQHNQSTSSLYGTDVVCEEHRN---------LIESISRQVVFDCAAAT 504
            |...:..:.  :|.|...:|...:|:         |.||         ||.:::..::|..:.:.
  Rat   425 EQALLPAILPSRPDAAAAEHEDMSSN---------ESRNAADEAFRRRLIANLAEHILFTASKSC 480

  Fly   505 SVMSTNALAFLLLTRFRNGAEEQILSEALDDL----RNSLSGCKDIGFSGESSQIVAYACDLLGS 565
            ::|||:.:|.|||.|.|.|..   ||..::|.    ...|:...|:||||.|..:|.:|..|||:
  Rat   481 AIMSTHIVACLLLYRHRQGIH---LSTLVEDFFVMKEEVLARDFDLGFSGNSEDVVMHAIQLLGN 542

  Fly   566 GLVTRSRDENGRLVIKAVNSVESFIELAYYSNMLTPHFALSSILLTTFHSLLPETENKKEAA--- 627
            .:............|....:|.|..||.:|||.:...|.:.:|:..:.:::    :||:.:.   
  Rat   543 CVTITHTSRKDEFFITPSTTVPSVFELNFYSNGVLHVFIMEAIIACSIYAV----QNKRGSGGSA 603

  Fly   628 ------VSRKKLIDTALENCQIYRYEFILNKPTQVLENLLYQQLDDLLISGCVLTEKLHDDLPNG 686
                  :|:::|:..|...|.:...|..::.|.|....:..:.:...:..| :||....||..:.
  Rat   604 GGLGNLISQEQLVRKAASLCYLLSNEGTISLPCQTFYQVCQETVGKFIQYG-ILTVAEQDDQEDV 667

  Fly   687 AEG-------RRLANVLAECLDEDGYEDVRDGEADEPKLLFASETPSQQRYIC---EVLAPFAWT 741
            :.|       ::|...|....||:. ||...||......|..|:....|::|.   .:|.|....
  Rat   668 SPGLAEQQWNKKLPEPLNWRSDEED-EDSDFGEEQRDCYLKVSQAKEHQQFITFLQRLLGPLLEA 731

  Fly   742 YVTVAQSLQILHKNSMLESEFISFVINDLSSKVKRGSCIYAESISTDSVRNCLKLLEKWSVIEVC 806
            |.:.|..:... :..:.|||::..:...|.::.:|...:||||.:...|:|.:|:.:...|.:..
  Rat   732 YSSAAIFVHTF-RGPVPESEYLQKLHRYLLTRTERNVAVYAESATYCLVKNAVKMFKDIGVFKET 795

  Fly   807 NQQGMRLISLNTLY--EMSRESL 827
            .|:...::.|:|.:  :.||:.|
  Rat   796 KQKRASVLELSTTFLPQGSRQKL 818

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
minoNP_001247343.2 PlsB 52..650 CDD:225488 163/547 (30%)
LPLAT_DHAPAT-like 232..443 CDD:153255 88/211 (42%)
GpamNP_058970.1 PlsB <131..663 CDD:225488 167/577 (29%)
LPLAT_DHAPAT-like 201..411 CDD:153255 88/211 (42%)
HXXXXD motif 230..235 4/4 (100%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166353575
Domainoid 1 1.000 138 1.000 Domainoid score I4736
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H7343
Inparanoid 1 1.050 304 1.000 Inparanoid score I2575
OMA 1 1.010 - - QHG51484
OrthoDB 1 1.010 - - D129142at33208
OrthoFinder 1 1.000 - - FOG0006866
OrthoInspector 1 1.000 - - otm45278
orthoMCL 1 0.900 - - OOG6_108110
Panther 1 1.100 - - O PTHR12563
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X2244
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1413.910

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