DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpL4 and RPS16B

DIOPT Version :10

Sequence 1:NP_524538.2 Gene:RpL4 / 43349 FlyBaseID:FBgn0003279 Length:401 Species:Drosophila melanogaster
Sequence 2:NP_010200.1 Gene:RPS16B / 851476 SGDID:S000002241 Length:143 Species:Saccharomyces cerevisiae


Alignment Length:114 Identity:23/114 - (20%)
Similarity:46/114 - (40%) Gaps:29/114 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   193 RAGRGTMRDRRRIARRGPLVVYDKDEGLRKAFRNIPGIETINVDKLN----LLKLAPGGHVGRFV 253
            :||:|.::     ....|:.:.: .|.||  |:....:..:.:||.:    .:::..||||.: |
Yeast    23 KAGKGLIK-----VNGSPITLVE-PEILR--FKVYEPLLLVGLDKFSNIDIRVRVTGGGHVSQ-V 78

  Fly   254 IWTESAFAR----LNDLFGTWKKPSTLKKGY------------NLPQPK 286
            .....|.|:    .:..:...:..:.|||.:            ..|:||
Yeast    79 YAIRQAIAKGLVAYHQKYVDEQSKNELKKAFTSYDRTLLIADSRRPEPK 127

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpL4NP_524538.2 PTZ00428 6..383 CDD:185611 23/114 (20%)
RPS16BNP_010200.1 PLN00210 3..143 CDD:177799 23/114 (20%)

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