DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpL4 and RPL4

DIOPT Version :10

Sequence 1:NP_524538.2 Gene:RpL4 / 43349 FlyBaseID:FBgn0003279 Length:401 Species:Drosophila melanogaster
Sequence 2:NP_563786.1 Gene:RPL4 / 837243 AraportID:AT1G07320 Length:282 Species:Arabidopsis thaliana


Alignment Length:272 Identity:57/272 - (20%)
Similarity:100/272 - (36%) Gaps:75/272 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 PLVSVYTEK-NEPAKDKNICLPAVFKAPIRPDVVNEVHQLLRRNNRQAYAVSELAGHQTSAESWG 71
            |::|...|| .|...|.........:|.:...:|.::      ||::.                |
plant    55 PILSFEGEKVGETYLDLKAAPEDTARAVVHRAIVTDL------NNKRR----------------G 97

  Fly    72 TGRAVARIPRVRGGGTHRSGQGAFGNMCR----------GGRMFAPTKTFRRWHRKVNVNQRRYA 126
            |...:.| ..|||||.....|...|:..|          ||.:|.|..  :.|..|:|..:::.|
plant    98 TASTLTR-GEVRGGGIKPYSQKKTGHARRGSQRTPLRPGGGVVFGPRP--KDWSIKINRKEKKLA 159

  Fly   127 LVSAIAASGVPALVQSKGHVIDGVSEFPLVVSDEVQKVQKTKQAVIFLRRLKIWADIQKVYKSQR 191
            :.:|::::     ..::|..|        ||.:..:|.:|.| ...||..::.|....|      
plant   160 ISTALSSA-----ASAEGGAI--------VVEEFGEKFEKPK-TKDFLAAMQRWGLDPK------ 204

  Fly   192 FRAGRGTMRDRRRIARRGPLVVYDKDEGLRKAFRNIPGIETINVDKLNLLKLAPGGHVGRFVIWT 256
                           .:...::.|.||.:.|:.|||..:..:....|||..:.   :..:.|: |
plant   205 ---------------EKAMFLMIDVDENVAKSSRNIGTLRMLTPRTLNLFDIL---NADKLVL-T 250

  Fly   257 ESAFARLNDLFG 268
            .:|...||..:|
plant   251 PAAVEFLNARYG 262

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpL4NP_524538.2 PTZ00428 6..383 CDD:185611 57/272 (21%)
RPL4NP_563786.1 RplD 52..262 CDD:439858 56/270 (21%)

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