DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpL4 and AT5G18380

DIOPT Version :10

Sequence 1:NP_524538.2 Gene:RpL4 / 43349 FlyBaseID:FBgn0003279 Length:401 Species:Drosophila melanogaster
Sequence 2:NP_197339.1 Gene:AT5G18380 / 831956 AraportID:AT5G18380 Length:146 Species:Arabidopsis thaliana


Alignment Length:75 Identity:21/75 - (28%)
Similarity:30/75 - (40%) Gaps:19/75 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   103 RMFAPTKTFRRWHRKVNVNQR-------RYALVSAIAASGVPALV---------QSKGHVIDGVS 151
            ::|.|.....: ||...||.|       ..:.|.||..|...|||         |||..:.|.:.
plant    50 KIFEPVLLLGK-HRFAGVNMRIRVNGGGHTSQVYAIRQSIAKALVAYYQKYVDEQSKKEIKDILV 113

  Fly   152 EF--PLVVSD 159
            .:  .|:|:|
plant   114 RYDRTLLVAD 123

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpL4NP_524538.2 PTZ00428 6..383 CDD:185611 21/75 (28%)
AT5G18380NP_197339.1 PLN00210 6..146 CDD:177799 21/75 (28%)

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