DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpL4 and rps16

DIOPT Version :10

Sequence 1:NP_524538.2 Gene:RpL4 / 43349 FlyBaseID:FBgn0003279 Length:401 Species:Drosophila melanogaster
Sequence 2:NP_001070200.1 Gene:rps16 / 767765 ZFINID:ZDB-GENE-050506-107 Length:146 Species:Danio rerio


Alignment Length:99 Identity:27/99 - (27%)
Similarity:43/99 - (43%) Gaps:18/99 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   309 RKRVFRSV---RRLNPL--TNVRQLIKLNPYA---EVLKRRAALAAEKRTVAKVLAKAKKQNVEL 365
            ||:...:|   :|.|.|  .|.|.|..:.|..   ::|:....|..|:.....:..:.|      
Zfish    15 RKKTATAVAHCKRGNGLIKVNGRPLEMIEPVTLQYKLLEPLLLLGKERFAGVDIRVRVK------ 73

  Fly   366 AKSHFANV-ATKAAANRAKLLAARKKKV--AAKK 396
            ...|.|.| |.:.|.::| |:|..:|.|  |:||
Zfish    74 GGGHVAQVYAIRQAISKA-LVAYYQKYVDEASKK 106

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpL4NP_524538.2 PTZ00428 6..383 CDD:185611 19/82 (23%)
rps16NP_001070200.1 PLN00210 6..146 CDD:177799 27/99 (27%)

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