DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpL4 and Mrpl4

DIOPT Version :10

Sequence 1:NP_524538.2 Gene:RpL4 / 43349 FlyBaseID:FBgn0003279 Length:401 Species:Drosophila melanogaster
Sequence 2:NP_001344828.1 Gene:Mrpl4 / 66163 MGIID:2137210 Length:300 Species:Mus musculus


Alignment Length:177 Identity:41/177 - (23%)
Similarity:59/177 - (33%) Gaps:63/177 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 RPLVSVYTEKNEPAKDKNICL----PAVFKAPIRPDVVNEVHQLLRRNNRQAYA----------- 56
            || |..:.|.....:.:.|.|    |.||....|.|:|::|....|...|.:||           
Mouse    60 RP-VQAWVESLRGFEQERIGLAELHPDVFATAPRLDIVHQVAIWQRNFRRISYANTKTRAELLNI 123

  Fly    57 ---------VSELAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTFR 112
                     .|:....|||.:   |..:.|.:|  .||..|            |.|  .||..: 
Mouse   124 THSNTLCQPSSKFLRSQTSGD---TNTSYATVP--AGGVAH------------GPR--GPTSYY- 168

  Fly   113 RWHRKVNVNQRRYALVSAIAASGVPA-----LVQSKGHVIDGVSEFP 154
                        |.|...:.|.|:..     |:|...|::|.: |.|
Mouse   169 ------------YMLPMKVRALGLKVALTVKLMQDDLHIVDSL-ELP 202

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpL4NP_524538.2 PTZ00428 6..383 CDD:185611 41/177 (23%)
Mrpl4NP_001344828.1 Ribosomal_L4 81..278 CDD:425758 35/155 (23%)

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