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Protein Alignment RpL4 and Mrpl4
DIOPT Version :9
Sequence 1: | NP_524538.2 |
Gene: | RpL4 / 43349 |
FlyBaseID: | FBgn0003279 |
Length: | 401 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001344828.1 |
Gene: | Mrpl4 / 66163 |
MGIID: | 2137210 |
Length: | 300 |
Species: | Mus musculus |
Alignment Length: | 177 |
Identity: | 41/177 - (23%) |
Similarity: | 59/177 - (33%) |
Gaps: | 63/177 - (35%) |
- Green bases have known domain annotations that are detailed below.
Fly 7 RPLVSVYTEKNEPAKDKNICL----PAVFKAPIRPDVVNEVHQLLRRNNRQAYA----------- 56
|| |..:.|.....:.:.|.| |.||....|.|:|::|....|...|.:||
Mouse 60 RP-VQAWVESLRGFEQERIGLAELHPDVFATAPRLDIVHQVAIWQRNFRRISYANTKTRAELLNI 123
Fly 57 ---------VSELAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTFR 112
.|:....|||.: |..:.|.:| .||..| |.| .||..:
Mouse 124 THSNTLCQPSSKFLRSQTSGD---TNTSYATVP--AGGVAH------------GPR--GPTSYY- 168
Fly 113 RWHRKVNVNQRRYALVSAIAASGVPA-----LVQSKGHVIDGVSEFP 154
|.|...:.|.|:.. |:|...|::|.: |.|
Mouse 169 ------------YMLPMKVRALGLKVALTVKLMQDDLHIVDSL-ELP 202
|
Known Domains:
Indicated by green bases in alignment.
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_COG0088 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
Isobase |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
0 | 0.000 |
Not matched by this tool. |
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
1 | 0.900 |
|
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