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Protein Alignment RpL4 and mRpL4
DIOPT Version :9
Sequence 1: | NP_524538.2 |
Gene: | RpL4 / 43349 |
FlyBaseID: | FBgn0003279 |
Length: | 401 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_524939.1 |
Gene: | mRpL4 / 49425 |
FlyBaseID: | FBgn0001995 |
Length: | 296 |
Species: | Drosophila melanogaster |
Alignment Length: | 160 |
Identity: | 41/160 - (25%) |
Similarity: | 65/160 - (40%) |
Gaps: | 32/160 - (20%) |
- Green bases have known domain annotations that are detailed below.
Fly 1 MSLGNARPLVSVYTEKNEPAKDKNICL----PAVFKAPIRPDVVNEVHQLLRRNNRQAYAVSELA 61
:|...|| ..:.|..:...::.:.| |.||.|..|.|::.|..:. :..|....:|
Fly 59 VSRNTAR---QAWIENTDAVAERKVGLIELHPDVFAAQPRVDIIQENVEW-----QSKYRYVSMA 115
Fly 62 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMF----APTKTFRR--WHRKVNV 120
..:|.||..|.|| ...|: :|||..|.| .....|.:||.:. :||..|.. ::::|
Fly 116 HTKTRAEVRGGGR--KPWPQ-KGGGRARHG-SLRSPMLKGGGVVHGPRSPTTHFYMLPFYKRV-- 174
Fly 121 NQRRYALVSAIAASGVPALVQSKGHVIDGV 150
..|.|.::.. |.|...|:||.|
Fly 175 ----LGLTSTLSVK----LAQDDLHIIDNV 196
|
Known Domains:
Indicated by green bases in alignment.
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_COG0088 |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
Isobase |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
0 | 0.000 |
Not matched by this tool. |
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
|
1 | 0.900 |
|
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