Sequence 1: | NP_524538.2 | Gene: | RpL4 / 43349 | FlyBaseID: | FBgn0003279 | Length: | 401 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_595879.1 | Gene: | rpl401 / 2539780 | PomBaseID: | SPBC1711.06 | Length: | 363 | Species: | Schizosaccharomyces pombe |
Alignment Length: | 346 | Identity: | 198/346 - (57%) |
---|---|---|---|
Similarity: | 262/346 - (75%) | Gaps: | 5/346 - (1%) |
- Green bases have known domain annotations that are detailed below.
Fly 6 ARPLVSVYTEKNEPAKDKNICLPAVFKAPIRPDVVNEVHQLLRRNNRQAYAVSELAGHQTSAESW 70
Fly 71 GTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTFRRWHRKVNVNQRRYALVSAIAASG 135
Fly 136 VPALVQSKGHVIDGVSEFPLVVSDEVQKVQKTKQAVIFLRRLKIWADIQKVYKSQRFRAGRGTMR 200
Fly 201 DRRRIARRGPLVVYDKDEGLRKAFRNIPGIETINVDKLNLLKLAPGGHVGRFVIWTESAFARLND 265
Fly 266 LFGTWKKPSTLKKGYNLPQPKMANTDLSRLLKSEEIRKVLR--DPRKRVFRS-VRRLNPLTNVRQ 327
Fly 328 LIKLNPYAEVLKRRAALAAEK 348 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
RpL4 | NP_524538.2 | PTZ00428 | 6..383 | CDD:185611 | 198/346 (57%) |
Ribosomal_L4 | 10..268 | CDD:294231 | 162/257 (63%) | ||
Ribos_L4_asso_C | 278..350 | CDD:291072 | 29/74 (39%) | ||
rpl401 | NP_595879.1 | PTZ00428 | 2..347 | CDD:185611 | 196/344 (57%) |
Ribosomal_L4 | 8..265 | CDD:294231 | 162/257 (63%) | ||
Ribos_L4_asso_C | 275..351 | CDD:291072 | 29/74 (39%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Domainoid | 1 | 1.000 | 334 | 1.000 | Domainoid score | I200 |
eggNOG | 1 | 0.900 | - | - | E1_COG0088 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 1 | 1.000 | - | - | H748 | |
Inparanoid | 1 | 1.050 | 398 | 1.000 | Inparanoid score | I385 |
OMA | 1 | 1.010 | - | - | QHG53550 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0003183 | |
OrthoInspector | 1 | 1.000 | - | - | otm47186 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_100849 | |
Panther | 1 | 1.100 | - | - | LDO | PTHR19431 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R1140 |
SonicParanoid | 1 | 1.000 | - | - | X2143 | |
TreeFam | 1 | 0.960 | - | - | ||
14 | 13.860 |