Protein Alignment RpL4 and mrpl-4

DIOPT Version :10

• Sequence 1: NP_524538.2
• Gene: RpL4 / 43349
• FlyBaseID: FBgn0003279
• Length: 401
• Species: Drosophila melanogaster
• Sequence 2: NP_505181.1
• Gene: mrpl-4 / 179230
• WormBaseID: WBGene00020717
• Length: 299
• Species: Caenorhabditis elegans
• Alignment Length: 299
• Identity: 67/299 - (22%)
• Similarity: 102/299 - (34%)
• Gaps: 94/299 - (31%)

  Fly    28 PAVFKAPIRPDVVNEVHQLLRRNN--RQAYAVSELAGHQTSAESWGTGRAVARIPRVRGGGTH-- 88
            |.:|:...|.|:       |.||.  :..|...::....|.||..|.||  ...|:.:.|..|
 Worm    71 PDIFRTSPRIDI-------LHRNLTWQSVYRNVQMTKMLTKAEMPGGGR--KPWPQKKTGRAHVG 126

  Fly    89 --RSGQ---GAFGNMCRGGRMFAPTKTFRRWHRKVNVNQRRYALVSAIAASGVPALVQSKGHVID 148
              ||.|   |.|.|..||.         |.|.         |.|..|:...|:...:..| |..|
 Worm   127 SIRSPQFIRGGFANGVRGP---------RTWF---------YMLPDAVRIQGLCVALTLK-HTQD 172

  Fly   149 GVSEFPLVVSDEVQKVQKTKQAVIFLRRLKIWADIQKVYKSQRFRAGRGTMRDRRRIARR---GP 210
                 .|.:.|::|.:|....        |.|.|:.:                    ||.   ..
 Worm   173 -----DLHIVDKIQNLQNGDP--------KYWIDLCE--------------------ARNYGYSV 204

  Fly   211 LVVYDKDE---GLRKAFRNIPGIETINVDKLNLLKLAPGGHVGRF--VIWTESAFARLND-LFGT 269
            |.|.|.||   ||.:|.:.:|.:..:.|..||...|.      ::  ::.:.||..|:.: |...
 Worm   205 LFVDDCDEISGGLAEAQQALPWLNVMPVYGLNCFSLM------KYDTIVLSRSALERVEERLLTQ 263

  Fly   270 WKKPSTLKKGYNLPQPKMANTDLSRLLKSEEIRKVLRDP 308
            ..:...:.|.|.....|      .::|:..|..:   ||
 Worm   264 MHRAGPMNKKYRYMDYK------DKILQEAEAEE---DP 293

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
RpL4	NP_524538.2	PTZ00428	6..383	CDD:185611	67/299 (22%)
mrpl-4	NP_505181.1	Ribosomal_L4	67..259	CDD:425758	59/254 (23%)