DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12259 and Fam50b

DIOPT Version :9

Sequence 1:NP_651595.1 Gene:CG12259 / 43347 FlyBaseID:FBgn0039557 Length:359 Species:Drosophila melanogaster
Sequence 2:NP_001100819.1 Gene:Fam50b / 306883 RGDID:1563458 Length:335 Species:Rattus norvegicus


Alignment Length:353 Identity:204/353 - (57%)
Similarity:268/353 - (75%) Gaps:19/353 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MAHYKGAASEAGRAAQLMKKREIQQQEIEFRKKKI-EEELKLDKIENKFATHYDAVEQQLKSSTI 64
            ||.|||...|||||..|:||||.|::::|..|::| ||.:...|::.||:.||||||.:|||||:
  Rat     1 MAQYKGTMREAGRAMHLIKKREKQKEQMEVLKQRIAEETIMKSKVDKKFSAHYDAVEAELKSSTV 65

  Fly    65 GLVTLDEMKAKQEDIVREREKKLAQKKDEKDREKQRALEAIQAEKNKQKRQIQALSFNLDDDEEE 129
            |||||::||||||.::||||.:||:::..:.|..|..:...:..:.::||:|..|||.||     
  Rat    66 GLVTLNDMKAKQEALLREREIQLAKREQLEQRRLQLEILREKERRRERKRKISNLSFTLD----- 125

  Fly   130 EEEDDEDHDKKQLKIKQEDQPKPKWTEIKEDILPIKKKKICKNPDVDTSFLPDREREEQENRLRE 194
             ||:|.|         |||..:.:..|:...   ..||.:.|||||||||||||||||:||||||
  Rat   126 -EEEDGD---------QEDGRQAEGAEVHSG---GAKKNLGKNPDVDTSFLPDREREEEENRLRE 177

  Fly   195 QLRQEWVMQQAELKDEDISITFSYWDGSGHRRNVLMKKGNSIYQFLQKCLELLRKEFIELKTVMA 259
            :|||||..::.::|.|::.|||||||||||||.|.|:||:::.|||::.|:.||::|.||:....
  Rat   178 ELRQEWEAKREKVKGEEVEITFSYWDGSGHRRTVRMRKGSTVQQFLKRALQGLRRDFRELRAAGV 242

  Fly   260 DQLMYVKEDLILPHHYSFYDFIVTKARGKSGPLFQFDVHDDVRMISDASVEKEESHAGKVLLRSW 324
            :|||||||||||||:::||||||.||||||||||.||||||||::|||::||:|||||||:||||
  Rat   243 EQLMYVKEDLILPHYHTFYDFIVAKARGKSGPLFSFDVHDDVRLLSDATMEKDESHAGKVVLRSW 307

  Fly   325 YERNKHIFPASRWEPYDPTKSYDKYTIK 352
            ||:|||||||||||||||.|.:|||||:
  Rat   308 YEKNKHIFPASRWEPYDPEKKWDKYTIR 335

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12259NP_651595.1 XAP5 110..351 CDD:282738 148/240 (62%)
Fam50bNP_001100819.1 XAP5 136..334 CDD:282738 133/200 (67%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166353157
Domainoid 1 1.000 334 1.000 Domainoid score I1093
eggNOG 1 0.900 - - E1_KOG2894
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 446 1.000 Inparanoid score I1576
OMA 1 1.010 - - QHG55025
OrthoDB 1 1.010 - - D1061864at2759
OrthoFinder 1 1.000 - - FOG0003077
OrthoInspector 1 1.000 - - otm45638
orthoMCL 1 0.900 - - OOG6_102806
Panther 1 1.100 - - O PTHR12722
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X2051
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1413.770

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