DRSC/TRiP Functional Genomics Resources

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Protein Alignment mRpS22 and mrps-22

DIOPT Version :9

Sequence 1:NP_524537.1 Gene:mRpS22 / 43345 FlyBaseID:FBgn0039555 Length:393 Species:Drosophila melanogaster
Sequence 2:NP_496281.1 Gene:mrps-22 / 174632 WormBaseID:WBGene00007564 Length:418 Species:Caenorhabditis elegans


Alignment Length:247 Identity:89/247 - (36%)
Similarity:143/247 - (57%) Gaps:8/247 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 VRQAIRQVSSAPTK-PAALQYERDPQPLFTDAETQRLLQSMTQLNLD-KVYR-KRTVPDNSSETK 77
            ||.|.:.:.::.:| |..:..|:    ||.:.|.|:||..:|:::|: ||:| :||.....|...
 Worm    18 VRSASQWIKASNSKTPDDINVEK----LFVEKEVQKLLTDLTEIDLEHKVFRPRRTSIQQRSHFA 78

  Fly    78 FMSNEQLDNEFQNLVVRAQQILQMPPIVQIKKDVERVIAKDTALKDFANSKFVFTDITFGRRQSE 142
            .|:.|:|:...:.:...|::.||..|:.:.:::..:::|||..||||..||||||||||.....:
 Worm    79 LMTEERLEKTRERMREEARRFLQFVPVKEPREESVQILAKDLELKDFDTSKFVFTDITFDATDQD 143

  Fly   143 RKVIVRDMDGTLAYATLDTTKRMNQLYFPLEGRQSYTPRMFALEELLAKCLAEHKYEFILDRLLV 207
            |.|:||:.||||..|..:...|||:.|:....|....|.:|: :..|...|.::.:||:||....
 Worm   144 RTVVVREPDGTLRTANPEEHDRMNRTYYQKPNRSVNPPPLFS-DPNLQNALDKNDHEFVLDWACW 207

  Fly   208 QYEPHEPEFHNISARVFEHLNESKEFDLLRSTRHFGPMAFFYAWHRCIDDLL 259
            .|||.:|.:..:|..||:.:|||.:|.::.|||||||..|:.|.:..|..||
 Worm   208 FYEPDDPAYVRLSQLVFDRINESGKFHVVTSTRHFGPFTFYLALNDNIQKLL 259

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mRpS22NP_524537.1 MRP-S22 41..282 CDD:287247 83/221 (38%)
mrps-22NP_496281.1 MRP-S22 40..282 CDD:287247 83/225 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160158295
Domainoid 1 1.000 148 1.000 Domainoid score I2748
eggNOG 1 0.900 - - E1_KOG3890
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H57030
Inparanoid 1 1.050 149 1.000 Inparanoid score I2977
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D363634at33208
OrthoFinder 1 1.000 - - FOG0007406
OrthoInspector 1 1.000 - - oto20270
orthoMCL 1 0.900 - - OOG6_107905
Panther 1 1.100 - - LDO PTHR13071
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4394
SonicParanoid 1 1.000 - - X5531
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1413.830

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