DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5003 and AT1G80630

DIOPT Version :9

Sequence 1:NP_651593.1 Gene:CG5003 / 43344 FlyBaseID:FBgn0039554 Length:713 Species:Drosophila melanogaster
Sequence 2:NP_565242.1 Gene:AT1G80630 / 844402 AraportID:AT1G80630 Length:578 Species:Arabidopsis thaliana


Alignment Length:335 Identity:69/335 - (20%)
Similarity:126/335 - (37%) Gaps:102/335 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    61 LDRETECNLMDFCDELLFEIFQYLDTSSILAVMHCSPRFENLLLDHRFYHHIDLSNGPLPMGILE 125
            :|...||..: .|..:..:.:::|::.|:::.:..|       :.:|......:::..:|     
plant     1 MDLPEECWEL-ICKAIDEDDYRFLESVSLVSTLFLS-------ITNRVRSTFVVTDRAVP----- 52

  Fly   126 EILGRATEKTHTIKICGPPSSQHVAGEFRQFTQTLSSVFPRVVQLKVLELEGVSLDFEYIHITE- 189
             :|.|...:...:|..          .|..|||.|:|:        :|::....||||.:.::: 
plant    53 -LLNRHLLRFRNLKRI----------RFSDFTQDLNSI--------LLQVSRSGLDFESVDVSQT 98

  Fly   190 --FP-ATLRRLKLKDC----------SVRVG---------------DTPKSIFYS--IEL--HLL 222
              || ..::.:|...|          .|.:|               .:|..:..|  |||  :|.
plant    99 RYFPDFEMKNVKELKCYGVGGFSDSDLVSIGVNFPLLEKLDISYPNSSPSRVSDSGVIELSSNLK 163

  Fly   223 DLEDLSIEDNSWFEPYYIMGLSK-LPSLRRLSLKGCQAL---C-KFVPYGS-------------- 268
            .|..::|..||:.....::.||: ...||.:..:.|..:   | |||...|              
plant   164 GLLKINISGNSFITDKSLIALSQNCLLLREIIFRDCDFISSDCIKFVLRNSRNLESLAINGIGLR 228

  Fly   269 -----MAARFGFQK-LESLDLRQTPINNSDLQCF--SAIENLKELLLESPQ---------ILHSK 316
                 :...|.|.: |..|||..:.::: ||.|.  ||...||:|||....         :|...
plant   229 PRESLLTDAFLFARCLTELDLSDSFLSD-DLLCLIASAKLPLKKLLLSDCHGFTFDGILYLLDKY 292

  Fly   317 QAVAKKNTNG 326
            |::...|..|
plant   293 QSLVHLNLKG 302

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5003NP_651593.1 F-box 68..114 CDD:279040 5/45 (11%)
leucine-rich repeat 610..635 CDD:275381
AT1G80630NP_565242.1 leucine-rich repeat 64..108 CDD:275381 14/61 (23%)
leucine-rich repeat 109..134 CDD:275381 4/24 (17%)
AMN1 121..335 CDD:187754 42/183 (23%)
leucine-rich repeat 135..159 CDD:275381 4/23 (17%)
leucine-rich repeat 165..190 CDD:275381 6/24 (25%)
leucine-rich repeat 191..216 CDD:275381 8/24 (33%)
leucine-rich repeat 244..268 CDD:275381 9/24 (38%)
leucine-rich repeat 269..294 CDD:275381 6/24 (25%)
leucine-rich repeat 295..320 CDD:275381 2/8 (25%)
leucine-rich repeat 321..346 CDD:275381
leucine-rich repeat 347..398 CDD:275381
AMN1 <386..508 CDD:187754
leucine-rich repeat 399..424 CDD:275381
leucine-rich repeat 425..448 CDD:275381
leucine-rich repeat 449..473 CDD:275381
leucine-rich repeat 474..499 CDD:275381
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1046098at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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